DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Pdk1

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_728471.2 Gene:Pdk1 / 38017 FlyBaseID:FBgn0020386 Length:836 Species:Drosophila melanogaster


Alignment Length:546 Identity:135/546 - (24%)
Similarity:223/546 - (40%) Gaps:122/546 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1442 EECSSTSSSASSE----DLDAVAMVTKAGS--------SNATTVLDSSNSSGSNAGTL------- 1487
            |:.|:|.|...|.    :|..:|:|.:|.|        .....|..:.|::.|..|:.       
  Fly    88 EKASATVSLGESNFRDINLKDLAVVVEAASRLHHQQNVCGCGAVSSTENNNNSRYGSSKYLTNGH 152

  Fly  1488 SVPSAGSGSGGGASTSSSPSIIRMSTCS-----ND----------------SGFEGGTAPSSPKK 1531
            :.|.|.:.:...:|.:::|....:..||     ||                .|::.......|::
  Fly   153 TSPLAAAVASNSSSVATTPHCRMLHNCSLQQYQNDIRQQTEILDMLRQQHQQGYQSQQQQQQPQQ 217

  Fly  1532 MLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKC 1596
            ..|......|.|:..:...||   ||   .|.:||.|...:|:||:..|.||....:...||||.
  Fly   218 QQEQQQQQEQSQQQQQLQNPA---PR---RSPNDFIFGRYIGEGSYSIVYLAVDIHSRREYAIKV 276

  Fly  1597 LKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGR 1661
            .:|.::|.:...|....||:|:...|..|...:|.||||.:..|:|||.|...||::.:|...|.
  Fly   277 CEKRLILRERKQDYIKREREVMHQMTNVPGFVNLSCTFQDQRSLYFVMTYARKGDMLPYINRVGS 341

  Fly  1662 FSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKL------------ 1714
            |.....|.|.||::...:.:|::.:::||||.:|:|||.:.|..|||||..|:            
  Fly   342 FDVACTRHYAAELLLACEHMHRRNVVHRDLKPENILLDEDMHTLIADFGSAKVMTAHERALATEH 406

  Fly  1715 -----------------------QIYLDKTAD------------------------------SFC 1726
                                   :.:.|:.::                              ||.
  Fly   407 CSEQRRSNSDEDDEDSDRLENEDEDFYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNRHRKASFV 471

  Fly  1727 GTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAE 1791
            ||..|::||:::........|.|:.|.::|:|:.|..||.|.::..:|..|.:....||.....:
  Fly   472 GTAQYVSPEVLQNGPITPAADLWALGCIVYQMIAGLPPFRGSNDYVIFKEILDCAVDFPQGFDKD 536

  Fly  1792 ATGILKGLLEKDYTKRIGSQ--YSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYF 1854
            |..:::.||..|...|:|:|  :.....|..|.||..|||..| ::|..||..|.:......:.|
  Fly   537 AEDLVRKLLRVDPRDRLGAQDEFGYYESIRAHPFFAGIDWQTL-RQQTPPPIYPYLPGVSQDEDF 600

  Fly  1855 DRVFTRERVRLTPIDKEILASMDQKQ 1880
            ...:|      .|.|.|  ..:|::|
  Fly   601 RSSYT------VPGDLE--PGLDERQ 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 100/378 (26%)
Pdk1NP_728471.2 STKc_PDK1 244..571 CDD:270733 86/326 (26%)
PH_PDK1 658..764 CDD:241293
Blue background indicates that the domain is not in the aligned region.

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