DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and kin-1

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001368699.1 Gene:kin-1 / 3565407 WormBaseID:WBGene00002189 Length:579 Species:Caenorhabditis elegans


Alignment Length:440 Identity:138/440 - (31%)
Similarity:219/440 - (49%) Gaps:71/440 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly  1445 SSTSSSASSEDLDAVAMVTKAGSSNATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSSSPSII 1509
            ||:||..|::.|               |:....|........:...::|..||||.|...     
 Worm   156 SSSSSPTSTQYL---------------TIGPQPNDEIQERYDMGNAASGGSSGGGGSARR----- 200

  Fly  1510 RMSTCSNDSGFEGGTAPSSPKKMLETSYTYSQFQKSGRFTAPATV-----------IPRFKNYS- 1562
                 .|..|..|            :.|..:....:||..|..|:           ..|::|.: 
 Worm   201 -----GNGGGNNG------------SDYNNAMVFSNGRLAAAETIKEFLDKAREDFKQRWENPAQ 248

  Fly  1563 ----VDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTK 1623
                :|||..:..||.||||:|:|.:.:.:..|||:|.|.|..|::...|:.||.|:::|. ...
 Worm   249 NTACLDDFDRIKTLGTGSFGRVMLVKHKQSGNYYAMKILDKQKVVKLKQVEHTLNEKRILQ-AID 312

  Fly  1624 HPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIY 1688
            .|:|.::..:|:..|:|:.|:|:::||::..|::..|||||..:|||.|:|:...::||...:||
 Worm   313 FPFLVNMTFSFKDNSNLYMVLEFISGGEMFSHLRRIGRFSEPHSRFYAAQIVLAFEYLHSLDLIY 377

  Fly  1689 RDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGV 1753
            ||||.:|:|:|..|:::|.|||..|   .:.....:.||||:|:|||||..:.||:.||||:.||
 Worm   378 RDLKPENLLIDSTGYLKITDFGFAK---RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGV 439

  Fly  1754 LLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDI 1818
            |:|||..|..||......:::..|.:....||.:.|.|...:||.||:.|.|||.|:..:...||
 Worm   440 LIYEMAAGYPPFFADQPIQIYEKIVSGKVKFPSHFSNELKDLLKNLLQVDLTKRYGNLKNGVADI 504

  Fly  1819 ADHIFFRPIDWGLLEKRQIEPP--------------FKPQVKHPLDTQYF 1854
            .:|.:|...||..:.:::|.||              ..|:|..|.||::|
 Worm   505 KNHKWFGSTDWIAIYQKKITPPSFSKGESNGRLFEALYPRVDGPADTRHF 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 111/299 (37%)
kin-1NP_001368699.1 STKc_PKA 254..556 CDD:271111 114/305 (37%)
Blue background indicates that the domain is not in the aligned region.

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