DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkcda

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_999873.1 Gene:prkcda / 334571 ZFINID:ZDB-GENE-030131-6503 Length:684 Species:Danio rerio


Alignment Length:367 Identity:199/367 - (54%)
Similarity:256/367 - (69%) Gaps:20/367 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1539 YSQFQKS----------------GRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRD 1587
            |..|.||                |....|.:.|......:.:.|.|..|||||||||||||||:.
Zfish   314 YQDFNKSPGPDVTDGTPYGHIWEGSSPRPPSRITHQTRITAEHFIFHKVLGKGSFGKVLLAELKG 378

  Fly  1588 TTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDL 1652
            |..::|:|.|||||||.||||:.|::|::||||...:|:|.||:.||||:.||||||||||||||
Zfish   379 TGEWFAVKALKKDVVLMDDDVECTMVEKRVLALAWDNPFLTHLYSTFQTKEHLFFVMEYLNGGDL 443

  Fly  1653 MFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIY 1717
            ||||||.|||...||.||.|||:.||:|||.|||||||||||||:||.:||::||||||||..::
Zfish   444 MFHIQEKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDGDGHIKIADFGMCKENVF 508

  Fly  1718 LDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIP 1782
            .|..|.:|||||||:||||:.|::|:.:|||||||||:||||||||||.|.||||||.||..:.|
Zfish   509 GDNRATTFCGTPDYIAPEILLGQQYSFSVDWWSFGVLVYEMLIGQSPFHGDDEDELFESIRMDTP 573

  Fly  1783 WFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKH 1847
            .:|.:|..:...:|:.|.|:|.::|:|.    .|:|..|.||:.::|..||.|:::|||||:||.
Zfish   574 HYPRWILLDTRDMLERLFERDPSRRLGI----VGNIRGHSFFKTVNWAALEGREVDPPFKPKVKA 634

  Fly  1848 PLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            |.|...|||.|..|:.||:..:|.::.||||..|.||::.||
Zfish   635 PNDCSNFDREFLSEKPRLSHCEKGLIDSMDQCAFAGFSFINP 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 160/257 (62%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 188/318 (59%)
prkcdaNP_999873.1 C1_1 160..209 CDD:278556
C1_1 232..284 CDD:278556
S_TKc 357..611 CDD:214567 160/257 (62%)
STKc_nPKC_delta 361..676 CDD:173710 188/318 (59%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 335 1.000 Domainoid score I1095
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55963
Inparanoid 1 1.050 617 1.000 Inparanoid score I862
OMA 1 1.010 - - QHG45425
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 1 1.000 - - otm24701
orthoMCL 1 0.900 - - OOG6_105998
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1414.010

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