DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Pkn3

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_006233834.1 Gene:Pkn3 / 296619 RGDID:1305921 Length:883 Species:Rattus norvegicus


Alignment Length:417 Identity:171/417 - (41%)
Similarity:233/417 - (55%) Gaps:13/417 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly  1482 SNAGTLSVPSAGSGSGGGASTSSSPSIIRMSTCSNDSGFEGGTAPSSPKKMLETSYTYSQFQKSG 1546
            |:..|:| |..|..|.....||||.|...........|.:....|..|:..|:.....:...|..
  Rat   464 SSPSTVS-PPKGCPSAAACETSSSASPSNFRPVKTLPGEDMKPPPKPPRLYLQEPAPGTPCTKRP 527

  Fly  1547 RFTAPATVIPRFKNYS------VDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLED 1605
            .......|.|.....|      :.||..|||||:|.||||||.:.:.|..|||||.|||..||..
  Rat   528 HMDPRTGVAPPLAALSTRNPPQLQDFRCLAVLGRGHFGKVLLVQYKGTGKYYAIKALKKQEVLGR 592

  Fly  1606 DDVDSTLIERKVL-ALG-TKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERAR 1668
            |::||...|:::| .:| |.||:|..|....||.||..||.|:|.|||||..|.|. .|.|.:|.
  Rat   593 DEIDSLYCEKRILETVGRTGHPFLLSLLACIQTSSHACFVTEFLPGGDLMMQIHED-VFPEPQAC 656

  Fly  1669 FYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMA 1733
            ||.|.::.||:|||:|.||||||||||:|||.:|.::|||||:||..|.......:|||||:::|
  Rat   657 FYLACVVLGLQFLHEKRIIYRDLKLDNLLLDAQGFLKIADFGLCKEGIGFGDRTSTFCGTPEFLA 721

  Fly  1734 PEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICN-EIPWFPVYISAEATGILK 1797
            ||::..|.|.:.||||..||||||||:|:.||.|..|||:|..|.| ::| .|.::||:...:::
  Rat   722 PEVLTQEAYTRAVDWWGLGVLLYEMLVGECPFPGDTEDEVFECIVNADVP-CPHFLSAQGLELIQ 785

  Fly  1798 GLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRER 1862
            .||:|...||:|:....|.:|....|||..:|..|..|.::|||.|.:..|.|.:||:..||...
  Rat   786 KLLQKSPEKRLGAGERDAEEIKVQPFFRTTNWQALLARTVQPPFVPTLCGPADLRYFEGEFTSLP 850

  Fly  1863 VRLT-PIDKEILASMDQKQFHGFTYTN 1888
            ..|| |:.:..|::..|..|..|.:.:
  Rat   851 PTLTPPVPRRSLSARQQAAFRDFDFVS 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 149/323 (46%)
Pkn3XP_006233834.1 HR1_PKN_1 14..79 CDD:212012
HR1 95..168 CDD:469609
HR1 168..>226 CDD:469609
C2 326..413 CDD:472691
PHA03378 <461..549 CDD:223065 19/85 (22%)
Protein Kinases, catalytic domain 553..877 CDD:473864 151/325 (46%)
Blue background indicates that the domain is not in the aligned region.

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