DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Prkacb

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001426403.1 Gene:Prkacb / 293508 RGDID:1310574 Length:398 Species:Rattus norvegicus


Alignment Length:315 Identity:119/315 - (37%)
Similarity:190/315 - (60%) Gaps:5/315 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly  1556 PRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLAL 1620
            |...|..::||.....||.||||:|:|.:.:.|..|||:|.|.|..|::...::.||.|:::|. 
  Rat    81 PPPSNAGLEDFERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQ- 144

  Fly  1621 GTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKG 1685
            ..:.|:|..|..:|:..|:|:.||||:.||::..|::..|||||..||||.|:|:...::||...
  Rat   145 AVEFPFLVRLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 209

  Fly  1686 IIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWS 1750
            :||||||.:|:|:|::|::::.|||..|   .:.....:.||||:|:|||||..:.||:.||||:
  Rat   210 LIYRDLKPENLLIDHQGYIQVTDFGFAK---RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA 271

  Fly  1751 FGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPA 1815
            .|||:|||..|..||......:::..|.:....||.:.|::...:|:.||:.|.|||.|:..:..
  Rat   272 LGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGV 336

  Fly  1816 GDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDK 1870
            .||..|.:|...||..:.:|::|.||.|:.:...||..||. :..|.:|::..:|
  Rat   337 SDIKTHKWFATTDWIAIYQRKVEAPFIPKFRGSGDTSNFDD-YEEEEIRVSITEK 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 115/301 (38%)
PrkacbNP_001426403.1 None
Blue background indicates that the domain is not in the aligned region.

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