DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and pka1

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_595159.1 Gene:pka1 / 2539781 PomBaseID:SPBC106.10 Length:512 Species:Schizosaccharomyces pombe


Alignment Length:495 Identity:152/495 - (30%)
Similarity:231/495 - (46%) Gaps:102/495 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1456 LDAVAMVTKAGSSNATTVLDSSNSSGS-----NAGTLS---------------VPSAGSGSGGGA 1500
            :|..|:.:| ||:|..:..|:.::|.|     |||:::               .||.....|..|
pombe     1 MDTTAVASK-GSTNVGSSTDTLSTSASLHPSMNAGSVNEYSEQQRHGTNSFNGKPSVHDSVGSDA 64

  Fly  1501 S--------------TSSSPSIIRMSTCSN--DS---------------GFEG--GTAPSSPKKM 1532
            |              ||..|..:..:|.|.  ||               |::.  ...||...:.
pombe    65 SVSNGHNNHNESSLWTSGIPKALEEATKSKKPDSLVSTSTSGCASAHSVGYQNIDNLIPSPLPES 129

  Fly  1533 LETSYTYSQFQKSG---------------------------------------RFTAPATVIPRF 1558
            ...|.:.|..|:..                                       |...||....: 
pombe   130 ASRSSSQSSHQRHSRDGRGELGSEHGERRSAMDGLRDRHIRKVRVSQLLDLQRRRIRPADHTTK- 193

  Fly  1559 KNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTK 1623
            ..|.:.||:||..||.||||:|.|.:......|||||.|:|..:::...::.|..||.:|: ..:
pombe   194 DRYGIQDFNFLQTLGTGSFGRVHLVQSNHNRLYYAIKVLEKKKIVDMKQIEHTCDERYILS-RVQ 257

  Fly  1624 HPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIY 1688
            ||::..|:.|||...:||.||::..||:|...:::..||.|:.|:||.||:|..|.:||...|:|
pombe   258 HPFITILWGTFQDAKNLFMVMDFAEGGELFSLLRKCHRFPEKVAKFYAAEVILALDYLHHNQIVY 322

  Fly  1689 RDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTAD--SFCGTPDYMAPEIIKGEKYNQNVDWWSF 1751
            ||||.:|:|||..||::|.|||..|..    .|::  :.||||||:|||||..:.||:..||||.
pombe   323 RDLKPENLLLDRFGHLKIVDFGFAKRV----STSNCCTLCGTPDYLAPEIISLKPYNKAADWWSL 383

  Fly  1752 GVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAG 1816
            |:|::|||.|..||...:..:|:.:|......:|.|.|..:..:|..||::|.|.|.|:....:.
pombe   384 GILIFEMLAGYPPFYSENPMKLYENILEGKVNYPSYFSPASIDLLSHLLQRDITCRYGNLKDGSM 448

  Fly  1817 DIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPL-DTQYFD 1855
            ||..|.:||.|.|..:..|:||.|:.|.::..: |:..||
pombe   449 DIIMHPWFRDISWDKILTRKIEVPYVPPIQAGMGDSSQFD 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 114/289 (39%)
pka1NP_595159.1 STKc_PKA_like 199..490 CDD:270732 118/295 (40%)
Blue background indicates that the domain is not in the aligned region.

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