DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Prkce

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_035234.1 Gene:Prkce / 18754 MGIID:97599 Length:737 Species:Mus musculus


Alignment Length:434 Identity:204/434 - (47%)
Similarity:278/434 - (64%) Gaps:36/434 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1475 DSSNSSGSNAGTLSVPSAGSGSGGGASTSSSPSIIRMSTCSNDSGFEGGTAPSSP---------- 1529
            |...:||.....|   :||:.|...|| .:|||       .:|   ...:||:||          
Mouse   311 DKITNSGQRRKKL---AAGAESPQPAS-GNSPS-------EDD---RSKSAPTSPCDQELKELEN 361

  Fly  1530 --KKMLETSYTYSQFQKS----GRFTAP---ATVIP-RFKNYSVDDFHFLAVLGKGSFGKVLLAE 1584
              :|.|.......:.:.|    |:..:|   ..|.| :.|...:|:|:|:.||||||||||:|||
Mouse   362 NIRKALSFDNRGEEHRASSATDGQLASPGENGEVRPGQAKRLGLDEFNFIKVLGKGSFGKVMLAE 426

  Fly  1585 LRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNG 1649
            |:.....||:|.|||||:|:|||||.|:.|:::|||..|||||..|:|.|||:..|||||||:||
Mouse   427 LKGKDEVYAVKVLKKDVILQDDDVDCTMTEKRILALARKHPYLTQLYCCFQTKDRLFFVMEYVNG 491

  Fly  1650 GDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKL 1714
            |||||.||.|.:|.|.|:|||.||:.|.|.|||:.|:|||||||||:|||.|||.::|||||||.
Mouse   492 GDLMFQIQRSRKFDEPRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKE 556

  Fly  1715 QIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICN 1779
            .|....|..:|||||||:||||::..:|..:||||:.|||:|||:.||.||...:||:||.||.:
Mouse   557 GIMNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH 621

  Fly  1780 EIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGD--IADHIFFRPIDWGLLEKRQIEPPFK 1842
            :...:||::|.||..|||..:.|:..||:|...:..|:  |..|.||:.|||.|||:::|:||||
Mouse   622 DDVLYPVWLSKEAVSILKAFMTKNPHKRLGCVAAQNGEDAIKQHPFFKEIDWVLLEQKKIKPPFK 686

  Fly  1843 PQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTY 1886
            |::|...|...||:.||||...||.:|:.|:..::|::|.||:|
Mouse   687 PRIKTKRDVNNFDQDFTREEPILTLVDEAIIKQINQEEFKGFSY 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 147/259 (57%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 176/319 (55%)
PrkceNP_035234.1 C2_PKC_epsilon 3..135 CDD:175981
C1_1 170..220 CDD:278556
Interaction with actin 223..228
C1_1 243..295 CDD:278556
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..356 17/58 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..398 4/27 (15%)
S_TKc 408..668 CDD:214567 147/259 (57%)
STKc_nPKC_epsilon 412..732 CDD:270743 176/319 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839311
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.880

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