DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Prkcd

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001297611.1 Gene:Prkcd / 18753 MGIID:97598 Length:700 Species:Mus musculus


Alignment Length:444 Identity:227/444 - (51%)
Similarity:290/444 - (65%) Gaps:51/444 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1457 DAVAMVTKAGSSNATTVLDSSNSSGSNAGTLSVPS-AGSGSGGGASTS-----SSPSIIR----M 1511
            :|:..||:..|..    ||::.|.|...|....|. :||...|.|.:.     |.||..:    .
Mouse   289 EALNQVTQRSSRK----LDTTESVGIYQGFEKKPEVSGSDILGEAGSHISLKLSFPSRAKEKDSS 349

  Fly  1512 STCSNDSGFEGGTAPSSPKKMLETSYTYSQ-FQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKG 1575
            .||.|:.                   ||.: ::.|.|.|             :::|.|..|||||
Mouse   350 ETCDNNG-------------------TYGKIWEGSTRCT-------------LENFTFQKVLGKG 382

  Fly  1576 SFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHL 1640
            ||||||||||:....|:|||||||||||.||||:.|::|::||||..:.|:|.||.|||||:.||
Mouse   383 SFGKVLLAELKGKDKYFAIKCLKKDVVLIDDDVECTMVEKRVLALAWESPFLTHLICTFQTKDHL 447

  Fly  1641 FFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVR 1705
            |||||:|||||||||||:.|||...||.||.||||.||:|||.|||||||||||||:||.:||::
Mouse   448 FFVMEFLNGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHSKGIIYRDLKLDNVMLDRDGHIK 512

  Fly  1706 IADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDE 1770
            ||||||||..|:.:..|.:|||||||:||||::|.||:.:||||||||||||||||||||.|.||
Mouse   513 IADFGMCKENIFGEGRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLIGQSPFHGDDE 577

  Fly  1771 DELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKR 1835
            ||||.||..:.|.:|.:|:.|:..|::.|.|:|..||:|    ..|:|..|.||:.|:|.|||||
Mouse   578 DELFESIRVDTPHYPRWITKESKDIMEKLFERDPDKRLG----VTGNIRIHPFFKTINWSLLEKR 638

  Fly  1836 QIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            ::||||||:||.|.|...||..|..|:.:|:..||.::.||||:.||||::.||
Mouse   639 KVEPPFKPKVKSPSDYSNFDPEFLNEKPQLSFSDKNLIDSMDQEAFHGFSFVNP 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 166/257 (65%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 198/318 (62%)
PrkcdNP_001297611.1 C1_1 159..208 CDD:365894
C1_1 231..281 CDD:365894
PKc_like 377..692 CDD:389743 198/318 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 336 1.000 Domainoid score I1118
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55963
Inparanoid 1 1.050 611 1.000 Inparanoid score I916
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45425
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 1 1.000 - - otm42516
orthoMCL 1 0.900 - - OOG6_105998
Panther 1 1.100 - - LDO PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1414.010

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