DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and pkc-2

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001359883.1 Gene:pkc-2 / 181166 WormBaseID:WBGene00004033 Length:753 Species:Caenorhabditis elegans


Alignment Length:556 Identity:217/556 - (39%)
Similarity:296/556 - (53%) Gaps:105/556 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1373 DPHKKIK-IDTTNKCYVKEEAPRYPLVATPRPLWKRE---KIVYSDE--------------NTDD 1419
            ||:.|.| |...:.|..|::..  .|.||..|.|...   |::..|:              :.:|
 Worm   266 DPYVKCKLIPEDSGCKSKQKTK--TLRATLNPQWNETFTYKLLPGDKDRRLSIEVWDWDRTSRND 328

  Fly  1420 ESGS---------EEGSGGSLDEDSDDESGGEECSSTSSSASSEDLDAVAMVTKAGSSNATTVLD 1475
            ..||         :|.:.|.....|.:|  ||..:...:....||::   .|.|..:.|..| .|
 Worm   329 FMGSLSFGISELMKEAASGWYKLLSAEE--GEFYNINITPEYDEDME---KVRKKMNENFIT-RD 387

  Fly  1476 SSNSSGSNAGTLSVPSAGSGSGGGAST----SSSPSIIRMSTCSNDSGFEGGTAPSSPKKMLETS 1536
            :|:|...:      |:|..     |||    ||:.::|:.|                        
 Worm   388 NSSSKPKD------PAAPR-----ASTLPLGSSNHNVIKAS------------------------ 417

  Fly  1537 YTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDV 1601
                                        ||:||.||||||||||||.|.:.|...:|||.|||||
 Worm   418 ----------------------------DFNFLTVLGKGSFGKVLLGEQKTTKELFAIKVLKKDV 454

  Fly  1602 VLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEER 1666
            :::||||:.|:.|::||||..|..:|..|...|||...|:||||::||||||:.||:.|:|.|..
 Worm   455 IIQDDDVECTMTEKRVLALPEKPSFLVALHSCFQTMDRLYFVMEFVNGGDLMYQIQQVGKFKEPV 519

  Fly  1667 ARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDY 1731
            |.||.|||..||.|||.|||||||||||||:|:.:||::|.||||||..|:.|.|..:|||||||
 Worm   520 AVFYAAEIAVGLFFLHSKGIIYRDLKLDNVMLERDGHIKITDFGMCKENIFGDATTKTFCGTPDY 584

  Fly  1732 MAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGIL 1796
            :|||||..:.|.::||||::||||:|||.||.||.|.||||||.:|......:|..:|.||..:.
 Worm   585 IAPEIILYQPYGKSVDWWAYGVLLFEMLAGQPPFDGEDEDELFTAITEHNVSYPKSLSKEAVSLC 649

  Fly  1797 KGLLEKDYTKRI---GSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVF 1858
            |.||.|:.:||:   |...|.:.||.:|.|||.|||..:|.|||:|||||::|....|:.||..|
 Worm   650 KALLIKNPSKRLGCTGDDESASRDIKEHPFFRRIDWFKIETRQIQPPFKPKLKTDRSTENFDHSF 714

  Fly  1859 TRERVRLTPIDKEILASMDQKQFHGFTYTNPHITLD 1894
            .:...::||.|.|:|.::...:|..|::.||....|
 Worm   715 LKLPTKMTPPDWEVLENLKGDEFSNFSFVNPFYVKD 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 169/321 (53%)
pkc-2NP_001359883.1 C1_cPKC_rpt1 108..165 CDD:410383
C1_cPKC_rpt2 175..228 CDD:410386
C2_PKC_alpha_gamma 232..362 CDD:175992 23/99 (23%)
STKc_cPKC 422..744 CDD:270739 170/321 (53%)
Blue background indicates that the domain is not in the aligned region.

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