DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkcdelta and pkc-3

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_495011.1 Gene:pkc-3 / 173914 WormBaseID:WBGene00004034 Length:597 Species:Caenorhabditis elegans


Alignment Length:419 Identity:176/419 - (42%)
Similarity:249/419 - (59%) Gaps:40/419 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1490 PSAGSGSGGGASTSSSPSIIRMSTCSNDSGFEGGT-------APSSPKKMLETSYTYSQFQKSGR 1547
            |::||..|..::|||       ||..:..|.:.|.       :|.|      ||:..|: ..:|.
 Worm   191 PASGSLKGARSNTSS-------STTRSGGGIDNGAFHEHEIESPGS------TSHDASR-AMNGN 241

  Fly  1548 FTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTL 1612
            .::...|       |::||..|.|:|:||:.||:.||...|...||||.:||::..||:|:|...
 Worm   242 GSSKWAV-------SLNDFRLLTVIGRGSYAKVVQAEHVSTRQIYAIKIIKKEMFNEDEDIDWVQ 299

  Fly  1613 IERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISG 1677
            .|:.|....:.:|:|..|...|||||.||||:|::.|||||||:|:..:..||.||||..|||..
 Worm   300 TEKSVFEAASNYPFLVGLHSCFQTESRLFFVIEFVPGGDLMFHMQQQRKLPEEHARFYSGEIILA 364

  Fly  1678 LKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKY 1742
            |.|||.:|||||||||||||:|.|||:::.|:||||..|.......:|||||:|:||||::|::|
 Worm   365 LHFLHSRGIIYRDLKLDNVLIDAEGHIKLTDYGMCKENIKDGDLTSTFCGTPNYIAPEILRGDEY 429

  Fly  1743 NQNVDWWSFGVLLYEMLIGQSPFS--GCD------EDELFWSICNEIPWFPVYISAEATGILKGL 1799
            ..:||||:.|||::||:.|:|||.  |..      ||.||..|.......|..:|..|:|||||.
 Worm   430 GFSVDWWALGVLMFEMMAGRSPFDIVGMQNSEENTEDYLFQIILERQIRIPRSLSVRASGILKGF 494

  Fly  1800 LEKDYTKRIGSQY---SPAGDIADHIFFRP-IDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTR 1860
            |.||.|:|:|.:.   ....|:.:|.|||. |||..||::.:.||:.|.|:...|..:||..||.
 Worm   495 LNKDPTERLGCKLDINEGLRDMKEHQFFRGFIDWEALEQKAVAPPYHPAVESDRDLTHFDHQFTD 559

  Fly  1861 ERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            |..:|:|.:.:::|.:||.:|.||.|.||
 Worm   560 ELPQLSPDNPDVIARIDQSEFDGFEYVNP 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 152/330 (46%)
pkc-3NP_495011.1 PB1_aPKC 13..95 CDD:99725
C1_aPKC 126..180 CDD:410344
STKc_aPKC 257..586 CDD:270740 151/328 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.