DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and rskn-2

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001348666.1 Gene:rskn-2 / 172581 WormBaseID:WBGene00008311 Length:773 Species:Caenorhabditis elegans


Alignment Length:351 Identity:135/351 - (38%)
Similarity:207/351 - (58%) Gaps:20/351 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1554 VIPRFKNYSVDDFHFLAVLGKGSFGKVLLAEL---RDTTYYYAIKCLKKDVVL-EDDDVDSTLIE 1614
            ::|..:..|:::|..|.|||||::|||.|...   :|....||:|.|:|..|| :...::.|:.|
 Worm     5 LMPEGEKVSMENFALLRVLGKGAYGKVFLVRKVGGKDHNTIYAMKVLRKTRVLTKQKTLEHTMAE 69

  Fly  1615 RKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLK 1679
            |:||......|:|.:||..|||::.|..||||:.||:|..|:...|.|..|.|||..||::..:.
 Worm    70 RQVLERLRGTPFLVNLFYAFQTDTKLHIVMEYVRGGELFTHLCSRGHFDLEAARFVIAELVVAID 134

  Fly  1680 FLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQI--YLDKTADSFCGTPDYMAPEIIKGEK- 1741
            .||::.:|||||||:|:|||.||||::.|||:.||.:  .||: |:|:|||.:||:||:|...: 
 Worm   135 SLHQRKVIYRDLKLENILLDEEGHVKLTDFGLSKLFLPGELDR-ANSYCGTIEYMSPEVINRPEG 198

  Fly  1742 -YNQNVDWWSFGVLLYEMLIGQSPFS-----GCDEDELFWSICNEIPWFPVYISAEATGILKGLL 1800
             |:..|||||.||:.:|:|.|.|||:     ...:|.....:..::| ||..:..:|...:..||
 Worm   199 GYSDVVDWWSLGVISFELLTGCSPFTVDGAQNSSKDIAKRIMTKKVP-FPKTMDVDARDFIGQLL 262

  Fly  1801 EKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRL 1865
            ||...||:|  |:...:|.:|.|...|||....||.::|...|::.|.||||:|...||.:....
 Worm   263 EKKLEKRLG--YNGVDEIKNHKFMSSIDWDAAVKRTLKPVIVPRIGHDLDTQFFSAEFTSQPPLY 325

  Fly  1866 TPIDKEILASMDQKQFHGFTYTNPHI 1891
            :|.:..:.|:   ..|.|::|.:|.:
 Worm   326 SPAESPLNAN---TLFRGYSYVSPSV 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 130/331 (39%)
rskn-2NP_001348666.1 Protein Kinases, catalytic domain 22..287 CDD:473864 110/268 (41%)
S_TK_X 285..344 CDD:214529 19/61 (31%)
STKc_MSK_C 374..694 CDD:270994
Blue background indicates that the domain is not in the aligned region.

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