DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Prkcd

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_579841.2 Gene:Prkcd / 170538 RGDID:67383 Length:673 Species:Rattus norvegicus


Alignment Length:372 Identity:210/372 - (56%)
Similarity:267/372 - (71%) Gaps:19/372 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1519 GFEGGTAPSSPKKMLETSYTYSQ-FQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLL 1582
            |||..||.|. ..:.:.:.||.: ::.|.|             ..:::|.|..||||||||||||
  Rat   313 GFEKKTAVSG-NDIPDNNGTYGKIWEGSNR-------------CRLENFTFQKVLGKGSFGKVLL 363

  Fly  1583 AELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYL 1647
            |||:....|:|||.|||||||.||||:.|::|::||||..::|:|.||.|||||:.|||||||:|
  Rat   364 AELKGKERYFAIKYLKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLICTFQTKDHLFFVMEFL 428

  Fly  1648 NGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMC 1712
            ||||||||||:.|||...||.||.||||.||:|||.|||||||||||||:||.:||::|||||||
  Rat   429 NGGDLMFHIQDKGRFELYRATFYAAEIICGLQFLHGKGIIYRDLKLDNVMLDKDGHIKIADFGMC 493

  Fly  1713 KLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSI 1777
            |..|:.:..|.:|||||||:||||::|.||:.:||||||||||||||||||||.|.||||||.||
  Rat   494 KENIFGENRASTFCGTPDYIAPEILQGLKYSFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI 558

  Fly  1778 CNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFK 1842
            ..:.|.:|.:|:.|:..|::.|.|:|..||:|    ..|:|..|.||:.|:|.|||||::|||||
  Rat   559 RVDTPHYPRWITKESKDIMEKLFERDPAKRLG----VTGNIRLHPFFKTINWNLLEKRKVEPPFK 619

  Fly  1843 PQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            |:||.|.|...||..|..|:.:|:..||.::.||||..|.||::.||
  Rat   620 PKVKSPSDYSNFDPEFLNEKPQLSFSDKNLIDSMDQTAFKGFSFVNP 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 196/318 (62%)
PrkcdNP_579841.2 C1_nPKC_theta-like_rpt1 152..212 CDD:410384
C1_nPKC_theta-like_rpt2 231..280 CDD:410387
Protein Kinases, catalytic domain 351..666 CDD:473864 196/318 (62%)
Blue background indicates that the domain is not in the aligned region.

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