DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkci

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_571930.2 Gene:prkci / 117507 ZFINID:ZDB-GENE-011105-1 Length:588 Species:Danio rerio


Alignment Length:413 Identity:171/413 - (41%)
Similarity:237/413 - (57%) Gaps:39/413 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1499 GASTSSSPSIIRMSTCSNDSGFEGGTAPSSPKKMLETSYTYSQF------------QKSGRFTAP 1551
            |......|.|.|:.        .|.|.|..|.::|....:....            ::||:..:.
Zfish   184 GRQVIQDPMIGRID--------PGSTHPEHPDQVLGKKNSTESINHEGEEHEAVGSRESGKAVSS 240

  Fly  1552 ATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERK 1616
            ..:|         ||..|.|:|:||:.||||..|:.|...||:|.:||::|.:|:|:|....|:.
Zfish   241 LGLI---------DFDLLRVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKH 296

  Fly  1617 VLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFL 1681
            |....:.||:|..|...|||||.||||:||:||||||||:|...:..||.||||.|||...|.:|
Zfish   297 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 361

  Fly  1682 HKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNV 1746
            |::|||||||||||||||.|||:::.|:||||..:....|..:|||||:|:||||::||.|..:|
Zfish   362 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 426

  Fly  1747 DWWSFGVLLYEMLIGQSPF---SGCD------EDELFWSICNEIPWFPVYISAEATGILKGLLEK 1802
            |||:.|||::||:.|:|||   ...|      ||.||..|..:....|..:|.:|..:|||.|.|
Zfish   427 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKGFLNK 491

  Fly  1803 DYTKRIGSQ-YSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLT 1866
            :..:|:|.. .:...||..|.|||.:||.|:|::|:.|||||.:........||..||.|.::||
Zfish   492 ESKERLGCHPQTGFADIMAHPFFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPIQLT 556

  Fly  1867 PIDKEILASMDQKQFHGFTYTNP 1889
            |.|.:.:..:||.:|.||.|.||
Zfish   557 PDDDDAVKKIDQSEFEGFEYINP 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 128/267 (48%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 154/328 (47%)
prkciNP_571930.2 PB1_aPKC 19..101 CDD:99725
C1_1 134..184 CDD:278556 171/413 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..213 6/26 (23%)
STKc_aPKC_iota 225..588 CDD:270769 162/364 (45%)
S_TKc 246..514 CDD:214567 128/267 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583288
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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