DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkci

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_571930.2 Gene:prkci / 117507 ZFINID:ZDB-GENE-011105-1 Length:588 Species:Danio rerio


Alignment Length:413 Identity:171/413 - (41%)
Similarity:237/413 - (57%) Gaps:39/413 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1499 GASTSSSPSIIRMSTCSNDSGFEGGTAPSSPKKMLETSYTYSQF------------QKSGRFTAP 1551
            |......|.|.|:.        .|.|.|..|.::|....:....            ::||:..:.
Zfish   184 GRQVIQDPMIGRID--------PGSTHPEHPDQVLGKKNSTESINHEGEEHEAVGSRESGKAVSS 240

  Fly  1552 ATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERK 1616
            ..:|         ||..|.|:|:||:.||||..|:.|...||:|.:||::|.:|:|:|....|:.
Zfish   241 LGLI---------DFDLLRVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKH 296

  Fly  1617 VLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFL 1681
            |....:.||:|..|...|||||.||||:||:||||||||:|...:..||.||||.|||...|.:|
Zfish   297 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 361

  Fly  1682 HKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNV 1746
            |::|||||||||||||||.|||:::.|:||||..:....|..:|||||:|:||||::||.|..:|
Zfish   362 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSV 426

  Fly  1747 DWWSFGVLLYEMLIGQSPF---SGCD------EDELFWSICNEIPWFPVYISAEATGILKGLLEK 1802
            |||:.|||::||:.|:|||   ...|      ||.||..|..:....|..:|.:|..:|||.|.|
Zfish   427 DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKGFLNK 491

  Fly  1803 DYTKRIGSQ-YSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLT 1866
            :..:|:|.. .:...||..|.|||.:||.|:|::|:.|||||.:........||..||.|.::||
Zfish   492 ESKERLGCHPQTGFADIMAHPFFRNVDWDLMEQKQVVPPFKPNISGEFGLDNFDAQFTNEPIQLT 556

  Fly  1867 PIDKEILASMDQKQFHGFTYTNP 1889
            |.|.:.:..:||.:|.||.|.||
Zfish   557 PDDDDAVKKIDQSEFEGFEYINP 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 154/328 (47%)
prkciNP_571930.2 PB1_aPKC 19..101 CDD:99725
C1_aPKC 133..186 CDD:410344 1/1 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..213 6/26 (23%)
STKc_aPKC_iota 225..588 CDD:270769 162/364 (45%)
Blue background indicates that the domain is not in the aligned region.

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