DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkcg

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_004916388.1 Gene:prkcg / 100496779 XenbaseID:XB-GENE-876551 Length:683 Species:Xenopus tropicalis


Alignment Length:631 Identity:236/631 - (37%)
Similarity:315/631 - (49%) Gaps:120/631 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1327 GSGSSSDD-----------YSS---VDGCANLSASM----------------------------- 1348
            |.|..|||           |||   .|.|.:|...|                             
 Frog    89 GKGPHSDDPRSRHKFKVHSYSSPTFCDHCGSLLYGMVHQGMKCACCEMNVHKRCVQNVPSLCGVD 153

  Fly  1349 ------KKKLRKEKKKQKAKAAAAAEAKRF---------DPHKKIKIDTTNKCYVKEEAPRYPLV 1398
                  :..:|.|....:.......||:..         ||:.|:|:....|...|::.  ..:.
 Frog   154 HTERRGRLHIRVEAINDEEFQVTVGEARNLIPMDPNGLSDPYVKLKLIPDPKNMTKQKT--RTVK 216

  Fly  1399 ATPRPLWKREKIVYSDENTDDESGSEEGSGGSLDEDSDDESGGEECSSTSSSASSEDLDAVAMVT 1463
            :|..|:| .|..::|.::.|::...      |::....|.:...:...:.|...||       :.
 Frog   217 STLNPVW-NEAFIFSLKSGDEDRRL------SVEVWDWDRTSRNDFMGSMSFGVSE-------IM 267

  Fly  1464 KAGSSNATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSSSPSIIRMSTCSNDSGFEGGTAPSS 1528
            |........:|:.......|     ||.|..                    .:|.|..       
 Frog   268 KNAVDGWYKLLNQEEGEYYN-----VPVADD--------------------EDDFGLR------- 300

  Fly  1529 PKKMLETSYTYSQFQKSGRFTAPATVIPRFK--------NYSVDDFHFLAVLGKGSFGKVLLAEL 1585
             :|....::....::|..|...|:......|        .:.:.||:||.||||||||||:|||.
 Frog   301 -QKFEACNFPLELYEKVRRGPVPSPSPTDSKRVNFFGTSRFHISDFNFLMVLGKGSFGKVMLAER 364

  Fly  1586 RDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGG 1650
            |.:...||||.|||||::::|||:.|::|::||||..:..:|..|..||||...|:|||||:|||
 Frog   365 RGSDELYAIKILKKDVIIQEDDVECTMVEKRVLALSDRPHFLTQLHSTFQTVDRLYFVMEYVNGG 429

  Fly  1651 DLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQ 1715
            |||:|||:.|:|.|..|.||.|||..||.|||.|||||||||||||:||.|||::|.||||||..
 Frog   430 DLMYHIQQVGKFKEPHAMFYAAEIAIGLFFLHNKGIIYRDLKLDNVMLDSEGHIKITDFGMCKEN 494

  Fly  1716 IYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNE 1780
            ||...|..:|||||||:|||||..:.|.::|||||:||||||||.||.||.|.||||||.||..:
 Frog   495 IYSGATTRTFCGTPDYIAPEIIAYQPYGKSVDWWSYGVLLYEMLAGQPPFDGEDEDELFQSIMEQ 559

  Fly  1781 IPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQV 1845
            ...:|..:|.||..|.||||.|...||:||......||.||.|||.|||..||:.:|:|||||: 
 Frog   560 TVSYPKSLSREAVSICKGLLTKHPLKRLGSGSDGERDIRDHAFFRWIDWERLERLEIQPPFKPR- 623

  Fly  1846 KHPL--DTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
              |.  ..:.||:.|||....|||.|:.:||.:||.:|.|||:.||
 Frog   624 --PCGKSGENFDKFFTRAPPVLTPPDQLVLAGIDQSEFAGFTFINP 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 155/257 (60%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 184/320 (58%)
prkcgXP_004916388.1 C1_1 36..88 CDD:278556
C1_1 101..153 CDD:278556 7/51 (14%)
C2_PKC_alpha_gamma 158..289 CDD:175992 24/151 (16%)
S_TKc 345..603 CDD:214567 155/257 (60%)
STKc_cPKC 348..666 CDD:270739 185/320 (58%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D143719at33208
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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