DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkch

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_002939521.2 Gene:prkch / 100151731 XenbaseID:XB-GENE-486685 Length:691 Species:Xenopus tropicalis


Alignment Length:413 Identity:195/413 - (47%)
Similarity:263/413 - (63%) Gaps:31/413 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1483 NAGTLSVPSAGSGSGGGASTSSSPSIIRMSTCSNDSGFEGGTAPSSPKKMLETSY--TYSQFQKS 1545
            |.|..||..|.:.:|.|....:.|  .:..:.|       |:..|....:.|.|.  |.||::  
 Frog   293 NCGVNSVDLANALAGMGLHPGNIP--FKQHSVS-------GSVDSDSNHLEEDSISNTSSQYK-- 346

  Fly  1546 GRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDS 1610
                           :.:|||.||.||||||||||:||:.:::...||:|.|||||:|:||||:.
 Frog   347 ---------------FGIDDFTFLRVLGKGSFGKVMLAKSKESDSLYAVKVLKKDVILQDDDVEC 396

  Fly  1611 TLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEII 1675
            |:.|:::|:|...||:|..|||.|||...||||||::||||||||||:|.||.|.||.||.|||.
 Frog   397 TMTEKRILSLACNHPFLTQLFCCFQTLDRLFFVMEFVNGGDLMFHIQKSRRFDEARACFYSAEIT 461

  Fly  1676 SGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGE 1740
            |.|.|||.||:|||||||||||||:|||.::|||||||..|....|..:|||||||:||||::..
 Frog   462 SALMFLHDKGVIYRDLKLDNVLLDHEGHCKLADFGMCKEGIREGCTTSTFCGTPDYIAPEILQEM 526

  Fly  1741 KYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYT 1805
            :|...||||:.||||||||.|.:||...:||:||.:|.|:...:|.::|.:|..||:..::|...
 Frog   527 QYGPLVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPGWLSQDAVEILQAFMKKKPA 591

  Fly  1806 KRIGSQYSPAGD--IADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPI 1868
            ||:|| .|..|:  |..|.||:.|:|..|.|:.|||||:|::|...|...||..|.:|...||||
 Frog   592 KRLGS-LSLGGEKAILWHPFFKDINWDELNKKTIEPPFRPRIKAREDVSNFDPEFIKEDAVLTPI 655

  Fly  1869 DKEILASMDQKQFHGFTYTNPHI 1891
            |:.:|..::|::|..|:||.|.:
 Frog   656 DESLLPLINQEEFRNFSYTAPEL 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 173/320 (54%)
prkchXP_002939521.2 C2_PKC_epsilon 7..139 CDD:175981
C1_nPKC_epsilon-like_rpt1 165..223 CDD:410385
C1_nPKC_epsilon-like_rpt2 243..297 CDD:410388 2/3 (67%)
STKc_nPKC_eta 356..678 CDD:270742 174/322 (54%)
Blue background indicates that the domain is not in the aligned region.

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