DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkcdb

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001352166.1 Gene:prkcdb / 100150844 ZFINID:ZDB-GENE-111129-1 Length:685 Species:Danio rerio


Alignment Length:366 Identity:208/366 - (56%)
Similarity:265/366 - (72%) Gaps:12/366 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly  1526 PSSPKKMLETSYTYSQFQKSGRFT--APATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDT 1588
            |:.|      |...||:.|....|  .||:.|......|::||.|..||||||||||:||||:..
Zfish   322 PADP------SAEGSQYGKFWDITPAVPASTIVSTVRVSLNDFVFQKVLGKGSFGKVMLAELKGK 380

  Fly  1589 TYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLM 1653
            ..|:|||.|||||||.||||:.|::|::||||..::|:|.||:||||::.|||||||||||||||
Zfish   381 GQYFAIKALKKDVVLMDDDVECTMVEKRVLALAWENPFLTHLYCTFQSKEHLFFVMEYLNGGDLM 445

  Fly  1654 FHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYL 1718
            ||||:.|||...||.||.||||.||::||.|||:|||||||||:||.:||::||||||||..:..
Zfish   446 FHIQDKGRFDLYRATFYAAEIICGLQYLHSKGIVYRDLKLDNVMLDKDGHIKIADFGMCKENMIG 510

  Fly  1719 DKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPW 1783
            :..|.:|||||||:||||:.|:||:.:||||||||||||||||||||.|.||||||.||..::|.
Zfish   511 ENRATTFCGTPDYIAPEILLGQKYSFSVDWWSFGVLLYEMLIGQSPFQGDDEDELFDSIRMDVPH 575

  Fly  1784 FPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHP 1848
            :|.:|:.||..:|:.|.|:|.|:|:|    ..|:|..|.||:.|:|..||||::.|||||:||..
Zfish   576 YPRWITKEAKDLLEKLFERDPTRRLG----VVGNIRGHAFFKTINWPALEKREVSPPFKPKVKSS 636

  Fly  1849 LDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            .|...|||.|..|:.||:..||.::.||||..|.||::.||
Zfish   637 SDCSNFDREFLSEKPRLSQSDKNLIDSMDQTAFAGFSFINP 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 162/257 (63%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 192/318 (60%)
prkcdbNP_001352166.1 C1_1 160..209 CDD:278556
C1_1 232..284 CDD:278556
PKc_like 362..677 CDD:328722 192/318 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 335 1.000 Domainoid score I1095
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55963
Inparanoid 1 1.050 617 1.000 Inparanoid score I862
OMA 1 1.010 - - QHG45425
OrthoDB 1 1.010 - - D222529at2759
OrthoFinder 1 1.000 - - FOG0000117
OrthoInspector 1 1.000 - - otm24701
orthoMCL 1 0.900 - - OOG6_105998
Panther 1 1.100 - - O PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 1 1.000 - - X125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1313.010

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