DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and pkn3

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001120197.1 Gene:pkn3 / 100145241 XenbaseID:XB-GENE-6085008 Length:934 Species:Xenopus tropicalis


Alignment Length:375 Identity:161/375 - (42%)
Similarity:230/375 - (61%) Gaps:8/375 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly  1521 EGGTAPS---SPKKMLETSYTYSQFQKSG-RFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVL 1581
            ||.|.||   ||.:.:..|......:..| :..|..|.:.|.....||||.|::|||:|.|||||
 Frog   555 EGATPPSPAESPGRAVGKSMKRIHGEDGGTQSNAEPTKVHRRTTLQVDDFTFISVLGRGHFGKVL 619

  Fly  1582 LAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLAL--GTKHPYLCHLFCTFQTESHLFFVM 1644
            |.:.::|...:|||.|||..::..|:::|...|:::...  .:.||:|.:||..|||:.|..|||
 Frog   620 LGQFKETGKNFAIKALKKRDIVSRDELESLQCEKRIFEAVNSSGHPFLVNLFGCFQTQGHACFVM 684

  Fly  1645 EYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADF 1709
            ||:.|||||.|| .|..|||..||||.|.::.||:|||:|.||||||||||:|:|..|.|:||||
 Frog   685 EYMPGGDLMMHI-HSNVFSEPTARFYSACVVLGLQFLHEKMIIYRDLKLDNLLMDASGFVKIADF 748

  Fly  1710 GMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELF 1774
            |:||..:.......:|||||:::|||::....|...||||..|||::|||:|:.||.|.||:|:|
 Frog   749 GLCKEGMGFGDRTSTFCGTPEFLAPEVLTDTSYTYAVDWWGLGVLIFEMLVGECPFPGDDEEEVF 813

  Fly  1775 WSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEP 1839
            .||.||...:|.::|.:|..|::.||.|...:|:|:....|.:|...:||:.|||..|..:|::|
 Frog   814 DSIVNEEVRYPRFLSNDAINIIRKLLRKSPERRLGAGVGDAEEIKPQLFFQEIDWDALYAQQVKP 878

  Fly  1840 PFKPQVKHPLDTQYFDRVFTRERVRLTPI-DKEILASMDQKQFHGFTYTN 1888
            |..|.:..|.|.:.||..||.::..|:|. |...|:|.||..|..|.:.:
 Frog   879 PVVPILSDPFDIRNFDEEFTGQKAILSPSDDPRPLSSADQLLFQDFDFVS 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 121/259 (47%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 144/322 (45%)
pkn3NP_001120197.1 HR1_PKN_1 17..82 CDD:212012
HR1_PKN3_2 103..176 CDD:212022
HR1_PKN3_3 186..259 CDD:212027
C2 362..445 CDD:301316
STKc_PKN 604..929 CDD:270741 146/326 (45%)
S_TKc 604..849 CDD:214567 118/245 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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