DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkcz

DIOPT Version :9

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_012821314.1 Gene:prkcz / 100101769 XenbaseID:XB-GENE-494709 Length:590 Species:Xenopus tropicalis


Alignment Length:335 Identity:160/335 - (47%)
Similarity:219/335 - (65%) Gaps:8/335 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly  1563 VDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYL 1627
            :.||..:.|:|:||:.||||..|:.....||:|.:||::|.:|:|:|....|:.|....:.:|:|
 Frog   247 LQDFELIRVIGRGSYAKVLLVRLKKNDQTYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFL 311

  Fly  1628 CHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLK 1692
            ..|...|||.|.||.|:||:||||||||:|...:..||.||||.|||...|.|||::||||||||
 Frog   312 VGLHSCFQTPSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLK 376

  Fly  1693 LDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYE 1757
            |||||||.:||:::.|:||||..:....|..:|||||:|:||||::||:|..:||||:.|||::|
 Frog   377 LDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE 441

  Fly  1758 MLIGQSPFSGC-------DEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPA 1815
            |:.|:|||...       .||.||..|..:....|.::|.:|:.:|||.|.||..:|:|.|....
 Frog   442 MMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCQLQTG 506

  Fly  1816 -GDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQK 1879
             .||..|.|||.|||.:|||:|:.||||||:......:.||..||.|.|:|||.|:|.:..:||.
 Frog   507 FSDIKSHTFFRSIDWDMLEKKQVVPPFKPQITDDYGLENFDTQFTSEPVQLTPDDEETIKRIDQS 571

  Fly  1880 QFHGFTYTNP 1889
            :|.||.|.||
 Frog   572 EFEGFEYINP 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 124/265 (47%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 156/326 (48%)
prkczXP_012821314.1 PB1_aPKC 15..97 CDD:99725
C1_1 130..179 CDD:365894
STKc_aPKC_zeta 234..590 CDD:270768 160/335 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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