DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and prkcba

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_957323.1 Gene:prkcba / 100006675 ZFINID:ZDB-GENE-040426-1354 Length:668 Species:Danio rerio


Alignment Length:631 Identity:220/631 - (34%)
Similarity:304/631 - (48%) Gaps:142/631 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1298 CLRDVDAELDDYIPSSAENSQEDDDDDDDGSGSSSDDYSSVDGCANLSASMKKKLRKEKKKQKAK 1362
            ||.::......::||..                 ..|::...|..:.|||:...:.....|:...
Zfish   131 CLMNIHKRCFKHVPSLC-----------------GTDHTEKRGRLHFSASITGNVLSVSVKEARN 178

  Fly  1363 AAAAAEAKRFDPHKKIKIDTTNKCYVKEEAPRYPLVATPRPLWKREKIVYSDENTD--------- 1418
            ......:...||:.|:|:....|...|::..  .:.....|:| .|...::.::||         
Zfish   179 LVPMDPSGLSDPYVKLKLIPDPKSESKQKTK--TIKGCLNPVW-NEDFTFALKDTDKDRRLYVEV 240

  Fly  1419 ---------DESGS----------------------EEGSGGSLDEDSDDESGGEECSSTSSSAS 1452
                     |..||                      |||...::....|:|.|.:|.|.....| 
Zfish   241 WDWDRGTRNDYMGSMSFGISELMNQSVDGWFKILACEEGVFFNVPVYVDEEEGNKELSKRFERA- 304

  Fly  1453 SEDLDAVAMVTKAGSSNATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSSSPSIIRMSTCSND 1517
                       |.|..       ::|:.|::...||...|.....            ||      
Zfish   305 -----------KIGPG-------TNNTDGASKNDLSKYDANGNQD------------RM------ 333

  Fly  1518 SGFEGGTAPSSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLL 1582
                                                        .:.||:|:.||||||||||:|
Zfish   334 --------------------------------------------KLADFNFIMVLGKGSFGKVML 354

  Fly  1583 AELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYL 1647
            ||.:.:...||:|.||||||::||||:.|::|::||||..|.|:|.||...|||...|:|||||:
Zfish   355 AERKGSDELYAVKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTHLHSCFQTMDRLYFVMEYI 419

  Fly  1648 NGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMC 1712
            :||||||.||::|:|.|..|.||..||..||.|||.|||||||||||||:||.|||::|||||||
Zfish   420 SGGDLMFQIQQTGKFKEPLAVFYAGEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMC 484

  Fly  1713 KLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSI 1777
            |..::...|..:|||||||:|||||..:.|.::||||::||||||||.||.||.|.||||||.||
Zfish   485 KENMFDKDTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSI 549

  Fly  1778 CNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFK 1842
            ......:|..:|.||..|.|||:.|...||:|.......||.:|.|||.:||..|:.::::||:|
Zfish   550 MEHHVSYPKSMSKEAVAICKGLMTKHPGKRLGCGLEGERDIKEHAFFRFVDWERLQNKEVQPPYK 614

  Fly  1843 PQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTN 1888
            |: ....|...||..|||....|||.|.|::.::||::|.||:|.|
Zfish   615 PK-SCGRDAGNFDLFFTRHPPILTPPDLEVIQNLDQEEFRGFSYVN 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 175/319 (55%)
prkcbaNP_957323.1 C1_cPKC_rpt1 31..88 CDD:410383
C1_cPKC_rpt2 98..151 CDD:410386 4/36 (11%)
C2_PKC_alpha_gamma 155..285 CDD:175992 22/132 (17%)
Protein Kinases, catalytic domain 337..659 CDD:473864 177/322 (55%)
Blue background indicates that the domain is not in the aligned region.

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