DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2574 and CDC34

DIOPT Version :9

Sequence 1:NP_572796.1 Gene:CG2574 / 32190 FlyBaseID:FBgn0030386 Length:239 Species:Drosophila melanogaster
Sequence 2:XP_005259747.1 Gene:CDC34 / 997 HGNCID:1734 Length:269 Species:Homo sapiens


Alignment Length:151 Identity:47/151 - (31%)
Similarity:74/151 - (49%) Gaps:20/151 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 ELQDIRKNPPPNCTADL-HHGDLLHWTAGVNGPVGSVYEGGHFRLDIRFPASYPFRAPRIRFTTR 133
            ||:.:::.|.......| ..|||.:|...:.||..:.||||:|:..::||..||:..|..||.|:
Human    16 ELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTK 80

  Fly   134 IYHCNVDSRGAICLDVL-------------GERWSPVMNVAKVLLSIYVLMSECNPDDPLVMCIA 185
            ::|.|:...|.:|:.:|             .|||:|..||..:|||:..|::|.|...|..:..:
Human    81 MWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDAS 145

  Fly   186 DQY------KTNRREHDKIAR 200
            ..|      |...||:..|.|
Human   146 VMYRKWKESKGKDREYTDIIR 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2574NP_572796.1 COG5078 66..208 CDD:227410 47/151 (31%)
UQ_con 66..203 CDD:278603 47/151 (31%)
CDC34XP_005259747.1 COG5078 6..162 CDD:227410 45/145 (31%)
UBCc 11..162 CDD:238117 45/145 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.