DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2574 and Ube2d4

DIOPT Version :9

Sequence 1:NP_572796.1 Gene:CG2574 / 32190 FlyBaseID:FBgn0030386 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_112263.1 Gene:Ube2d4 / 79435 RGDID:69425 Length:147 Species:Rattus norvegicus


Alignment Length:143 Identity:73/143 - (51%)
Similarity:99/143 - (69%) Gaps:0/143 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RIKSELQDIRKNPPPNCTADLHHGDLLHWTAGVNGPVGSVYEGGHFRLDIRFPASYPFRAPRIRF 130
            ||..||.|:.::||..|:|.....|:.||.|.:.||..|.|:||.|.|.|.||..|||:.|::.|
  Rat     5 RIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEF 69

  Fly   131 TTRIYHCNVDSRGAICLDVLGERWSPVMNVAKVLLSIYVLMSECNPDDPLVMCIADQYKTNRREH 195
            ||||||.||:|.|:||||:|..:|||.:.::||||||..|:.:.|||||||..||..|||:|.::
  Rat    70 TTRIYHPNVNSNGSICLDILRSQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKY 134

  Fly   196 DKIARHWTKLFAM 208
            ::.||.||:.:||
  Rat   135 NRTAREWTQKYAM 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2574NP_572796.1 COG5078 66..208 CDD:227410 71/141 (50%)
UQ_con 66..203 CDD:278603 69/136 (51%)
Ube2d4NP_112263.1 UBCc 1..146 CDD:412187 71/140 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166336863
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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