DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2574 and ube2e3

DIOPT Version :9

Sequence 1:NP_572796.1 Gene:CG2574 / 32190 FlyBaseID:FBgn0030386 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_957215.2 Gene:ube2e3 / 321689 ZFINID:ZDB-GENE-030131-408 Length:209 Species:Danio rerio


Alignment Length:211 Identity:93/211 - (44%)
Similarity:130/211 - (61%) Gaps:7/211 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSDQVNSQTEMETEARARAEVEVE----VEPEVLSRASVASSVEETAPSTSHSASGKSTEAPLT 61
            |||::..|..|..:.:...::.:..    .|||........:..::...||..|:   .|.|.|:
Zfish     1 MSSERQRSDDESPSTSSGSSDADQRDLPVPEPEEQEERKQPTPPQQQKKSTKLSS---KTTAKLS 62

  Fly    62 GCVVRIKSELQDIRKNPPPNCTADLHHGDLLHWTAGVNGPVGSVYEGGHFRLDIRFPASYPFRAP 126
            ....||:.||.:|..:|||||:|.....::..|.:.:.||.|||||||.|.|||.|.:.|||:.|
Zfish    63 SSAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPP 127

  Fly   127 RIRFTTRIYHCNVDSRGAICLDVLGERWSPVMNVAKVLLSIYVLMSECNPDDPLVMCIADQYKTN 191
            ::.|.|||||||::|:|.||||:|.:.|||.:.::||||||..|:::|||.||||..||.||.||
Zfish   128 KVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLTN 192

  Fly   192 RREHDKIARHWTKLFA 207
            |.|||:|||.|||.:|
Zfish   193 RAEHDRIARQWTKRYA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2574NP_572796.1 COG5078 66..208 CDD:227410 79/142 (56%)
UQ_con 66..203 CDD:278603 75/136 (55%)
ube2e3NP_957215.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0417
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1337945at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24068
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.