DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2574 and Ube2a

DIOPT Version :9

Sequence 1:NP_572796.1 Gene:CG2574 / 32190 FlyBaseID:FBgn0030386 Length:239 Species:Drosophila melanogaster
Sequence 2:NP_001013955.1 Gene:Ube2a / 298317 RGDID:1359534 Length:162 Species:Rattus norvegicus


Alignment Length:152 Identity:49/152 - (32%)
Similarity:84/152 - (55%) Gaps:15/152 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 RIKSELQDIRKNPPPNCTADLHHGDLLHWTAGVNGPVGSVYEGG-H---------FRLDIRFPAS 120
            |:..:.:.::::||...:......:::.|.|.:.||.|:.:|.| |         |:|.|.|...
  Rat     8 RLMRDFKRLQEDPPAGVSGAPSENNIMVWNAVIFGPEGTPFEDGTHVETTGQLGTFKLTIEFTEE 72

  Fly   121 YPFRAPRIRFTTRIYHCNVDSRGAICLDVLGERWSPVMNVAKVLLSIYVLMSECNPDDPLVMCIA 185
            ||.:.|.:||.::::|.||.:.|:||||:|..||||..:|:.:|.||..|:.|.||:.|.....|
  Rat    73 YPNKPPTVRFVSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAA 137

  Fly   186 DQYKTNRREHDK-----IARHW 202
            ..|:.|:||::|     :.:.|
  Rat   138 QLYQENKREYEKRVSAIVEQSW 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2574NP_572796.1 COG5078 66..208 CDD:227410 49/152 (32%)
UQ_con 66..203 CDD:278603 49/152 (32%)
Ube2aNP_001013955.1 UQ_con 8..155 CDD:395127 48/146 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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