DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB9 and vnd

DIOPT Version :10

Sequence 1:NP_076922.1 Gene:HOXB9 / 3219 HGNCID:5120 Length:250 Species:Homo sapiens
Sequence 2:NP_476786.2 Gene:vnd / 31003 FlyBaseID:FBgn0261930 Length:723 Species:Drosophila melanogaster


Alignment Length:330 Identity:78/330 - (23%)
Similarity:112/330 - (33%) Gaps:110/330 - (33%)


- Green bases have known domain annotations that are detailed below.


Human    23 APPAKFPSGQYASSRQPGHAEHLEFPSCSFQPK-APVFGASWAPLSPHASG-------------- 72
            |||: .|..|:...:| .|..||..|....|.. ||:      ||:.|.||              
  Fly   289 APPS-HPQQQHPHHQQ-HHHPHLLLPQQHHQQAVAPL------PLAHHQSGEAQSHAHANAAAAH 345

Human    73 --------------------SLP-----------SVYHPYIQPQGVPPAESRYLRT-----WLEP 101
                                :||           |.||...|........|.:::.     ..:|
  Fly   346 LLASHNAAAAAAVAAGQYLPNLPKNFPGSFGDEMSSYHHMAQTMLQHSGRSAWIKENELYGTQQP 410

Human   102 APRGEAAPGQGQAA-------VKAEPLL---------GAPGELLKQGTPEYSLETSAGR------ 144
            |.....:|...:.:       .:..|.|         .|..:.|..|...::|..|:|.      
  Fly   411 ASPDSTSPVTSEVSYTYIGSNCQTSPALSGDYKSYSRSADSDALSVGDALHTLHGSSGNGSAGGA 475

Human   145 ---EAVLSNQR-------------------PGYGDNKICEG-SEDKERPDQTNPS----ANWLHA 182
               .|:.:|..                   .|:.|:...:| .||.:..|..:.|    ||....
  Fly   476 PTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGGDANGSDG 540

Human   183 --RSSRKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNRRMKMKKMNK 245
              ...||:|..:||.||.|||:.|....||:...|..:|.|:.|:..||||||||.|.|.|:...
  Fly   541 LPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKTKRAQN 605

Human   246 EQGKE 250
            |:|.|
  Fly   606 EKGYE 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB9NP_076922.1 Hox9_act 1..172 CDD:461369 43/244 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..47 9/23 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..182 10/56 (18%)
Homeodomain 186..242 CDD:459649 27/55 (49%)
vndNP_476786.2 Homeodomain 546..602 CDD:459649 27/55 (49%)

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