DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir11a and Ir48b

DIOPT Version :9

Sequence 1:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_610697.1 Gene:Ir48b / 36254 FlyBaseID:FBgn0033648 Length:600 Species:Drosophila melanogaster


Alignment Length:662 Identity:124/662 - (18%)
Similarity:236/662 - (35%) Gaps:166/662 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VRAQPTGRDVLLSRLGNQQNELNTRRLANASSYLTRNYI----ANRINTLVVREICVECPYEL-- 83
            ||.|.. .|:::        |||.|.|      ::.|::    ::::|...::.:....|..|  
  Fly    21 VRTQGL-NDIII--------ELNQRLL------ISNNFLYCNQSDKLNEYEIKYLQHMPPISLMI 70

  Fly    84 -SERQRQLVDQILASLAPELSVLLHKGTAEETTWEYTLFVVNDHTAFTGQVFIFPDELLEREFFC 147
             :..:.....|:..:|..:..:.|..|. ||..::: |..:|.|..|...:.:. ||.::     
  Fly    71 FTSIESMNFTQVEYNLGADNKLFLIMGN-EEPPYDF-LHALNLHFQFAEYIIVI-DEPVD----- 127

  Fly   148 IVVVSEIQSRQFVRQTVGSIVKSNLQMHFVNVVVVAQLEDGTV-----GTYSYKLFKANCTPGIT 207
                               :.||...:.|||.:    .:.|.|     .:|..||:.....|...
  Fly   128 -------------------LKKSTKWLDFVNHL----WQQGYVQLLIYTSYDEKLYHKIIFPETV 169

  Fly   208 VRQ--INHFDRITGKPQQSMPDL--YPVRNGHLGDCP-----FNVGAAHMPPHLIYKRHKDPPPA 263
            :.:  :..:..|.|    |..:|  ||||.....:.|     .|....|:               
  Fly   170 IEETLVEQYISIRG----SFNNLYGYPVRVAAYNNAPRSMLYVNRWGKHI--------------- 215

  Fly   264 SNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMP-QEPSQIFGEGNVSGCFRQLADGTVSIAIGG 327
                     .||.   .::.|...:..|...::| ..||.  ..||   |...|.:.||.:....
  Fly   216 ---------FAGF---YMRFLRAFIDARNGSFVPVLTPSN--SPGN---CTLNLVNETVDVCADA 263

  Fly   328 LSGSDKRRSLFSKSTVYHQSNFVMVVRRDRYLGRLGPLILPFRGKLWGVIIVILLLAV--LSTC- 389
            |:.:.   :.||.:..:..::..::|...:.|.....|..||:..:|..:::.:||.|  ||.. 
  Fly   264 LAANP---AAFSLTHGFRIASANVLVTHAKPLHSYRYLTAPFQWSVWACLVIYVLLVVNFLSFIG 325

  Fly   390 WLRS-RLGLSHPIEDLLTVIVGNPIPDHRLPGKGFLRYLLASWMLLT-LVLRCAYQARLFDVLRL 452
            |||| :...|..:.::.:.::.:......:.|:.  ||:|...:.:. .|....|...|..:|..
  Fly   326 WLRSGKWEFSKYLLEVFSSLLFSGFYLKEIRGRE--RYILFGVLFIAGFVYSTEYLGLLKSMLIS 388

  Fly   453 SRHRPLPKDLSGLIKDNYTMVANGYHDFYPLELTCRQ---PLDFSARFERV--QRAAPDERLTTI 512
            ............|::.|.|::.:.|......:....:   |:.....||.:  .|...|:....|
  Fly   389 EVFEKQIDTFEALVESNITLMVDPYDKILFAKYNMPEILSPIMELVSFETLLKHRNRFDQDYAYI 453

  Fly   513 ALISNLAYWNH-----KHPNISRLTFVRQPIYMYHLVIYFP--RRFFLRPAIDRKIKQLLSAGVM 570
            .....:|.:::     |||.:.|:     ||....|....|  :|:||:                
  Fly   454 LFSDRMALYDYAQQFLKHPKLLRI-----PIDFSFLYTGIPMRKRWFLK---------------- 497

  Fly   571 AHIERR-YMQYEN--KRKVASNDP-----------VLLRRITKSIMNGAYRIHGLV-----IVLA 616
            .|:.|. |..:|:  .||:|.:..           ::...:....:|..|.:...:     .:||
  Fly   498 HHLGRAWYWAFESGLTRKLALDADFEAVRVGYLSFLITEHVEAQPLNVDYFVMPAIALAIGYILA 562

  Fly   617 TGMFILELLAGR 628
            ...|::|:.|.|
  Fly   563 LLSFVIEMTAWR 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 10/49 (20%)
Ir48bNP_610697.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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