DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir11a and Ir40a

DIOPT Version :9

Sequence 1:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:529 Identity:109/529 - (20%)
Similarity:174/529 - (32%) Gaps:149/529 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 FNVGAAHMPP--HLIYKRH---KDPPPASNVSIPAEDL---AGIDWDLLQLLAKALKFRIQLYMP 297
            |.|...|.||  .:.|..:   :|....|..||....:   .|.|..||.||:|.:.||.:    
  Fly   218 FRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRDHRLLMLLSKHMNFRFK---- 278

  Fly   298 QEPSQIFGEGNVSGCFRQ----------------LADGTVSIAIG--GLSGSDKRRSLFSKSTVY 344
                .|...|...|..|.                |..|.....:|  |||...::...||..|:.
  Fly   279 ----YIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGLSWERRKAIEFSFFTLA 339

  Fly   345 HQSNFVMVVRRDRYLGRLGPLILPFRGKLWGVIIVILL--------LAVLSTCWLR-------SR 394
            ....|  .....|.|.....::.||:..:|..:|:.::        :..|...|.|       ..
  Fly   340 DSGAF--ATHAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWRRRWANSDVEH 402

  Fly   395 LG--------LSHPIEDLLTVIVGNPIPDHRLPGKGF-------LRYLLAS-------------- 430
            ||        |......||.:.....:..|::|.:.|       ||..|..              
  Fly   403 LGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNELHNGYRAKFL 467

  Fly   431 ----WMLLTLVLRCAYQARL-FDVLRLSRHRP---LPKDLSGLIKDNY-----------TMVANG 476
                |:..|.||...|.|:| ....|.:|..|   |.:..:.:|.|.|           .|:.||
  Fly   468 TIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDGYRLYVEKESSSLEMLENG 532

  Fly   477 YHDFYPLELTCRQ-----PLDF-----SARFERVQRAAPDERLT--TIALISNLAYWNHKHPNIS 529
            ...|..|....||     |..|     .|..:.:.....|:.:.  ...|..|:..:...:..:|
  Fly   533 TELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVLGGRETLFFNVQQYGSNNFQLS 597

  Fly   530 RLTFVRQPIYMYHLV---IYFPRRFFLRPAIDRKIKQLLSAGVM-----AHIERRYMQYENKR-- 584
            :..:.|     |..|   |..|   || .:::..:.||..:|::     |...::|.:.|..|  
  Fly   598 QKLYTR-----YSAVAVQIGCP---FL-GSLNNVLMQLFESGILDKMTAAEYAKQYQEVEATRIY 653

  Fly   585 -------------KVASNDPVLLRRITKSIMNGAYRIHGLVIVLATGMFILELLAGRSNGRLRRW 636
                         :..|.|..::..:...::.||:...| |..||.|:.:|..:......:.|.|
  Fly   654 KGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALG-VGSLAAGVILLLEIVFIKLDQARLW 717

  Fly   637 M-----EWV 640
            |     :|:
  Fly   718 MLCSRLQWI 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 13/67 (19%)
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 31/127 (24%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 17/95 (18%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 30/149 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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