DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir11a and Ir21a

DIOPT Version :9

Sequence 1:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001097043.1 Gene:Ir21a / 33157 FlyBaseID:FBgn0031209 Length:842 Species:Drosophila melanogaster


Alignment Length:708 Identity:146/708 - (20%)
Similarity:270/708 - (38%) Gaps:172/708 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GNQQNELNTRR------LAN--------ASSYLTRNYIANRINTLV--VREICVE----CP---- 80
            ||.:||...:|      ..|        ||.:...:|...:.|:||  |.:|..|    ||    
  Fly    53 GNNENEFRQKRRIVPTFQGNPRPRGELLASKFHVNSYNFEQTNSLVGLVNKIAQEYLNKCPPVIY 117

  Fly    81 YE-LSERQRQLVDQILASLAPELSVLLHKGTAEETTWEYTLFVVNDHTAFTGQ--------VFIF 136
            |: ..|:...|   ||.:|...:.:..:.|   |...:|..    .:..||..        :...
  Fly   118 YDSFVEKSDGL---ILENLFKTIPITFYHG---EINADYEA----KNKRFTSHIDCNCKSYILFL 172

  Fly   137 PDELLEREFF------CIVVVSEIQSRQF-VRQTVGSIVKSNLQMHFVNVVVVAQ------LEDG 188
            .|.|:.|:..      .:|:||  :|.|: :|..:.|.:.||:    ||::|:.:      :.:.
  Fly   173 SDPLMTRKILGPQTESRVVLVS--RSTQWRLRDFLSSELSSNI----VNLLVIGESLMADPMRER 231

  Fly   189 TVGTYSYKLFK---ANCTPGITVRQINHFDRITGKPQQSMP--DLYPVR-----NGHLGDCPFNV 243
            ....|::||:.   .:.||.:....|        |...|.|  :|:|.:     .||    .|.:
  Fly   232 PYVLYTHKLYADGLGSNTPVVLTSWI--------KGALSRPHINLFPSKFQFGFAGH----RFQI 284

  Fly   244 GAAHMPPHLIYKRHKDPPPASNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMPQEPSQIFGEGN 308
            .||:.||.:...|..|   :|.:.....|  |:::.||.:::|.|.|.|.:  .:.|::....|.
  Fly   285 SAANQPPFIFRIRTLD---SSGMGQLRWD--GVEFRLLTMISKRLNFSIDI--TETPTRSNTRGV 342

  Fly   309 VSGCFRQLADGTVSIAIGGLSGSDKRRSLFSKSTVYHQSN---FVMVVRR--DRYLGRLGPLILP 368
            |.....|:.:.||.|.:.|:. ..:.|.:.|..:|.|..:   |:.:..:  .:|...:|    |
  Fly   343 VDTIQEQIIERTVDIGMSGIY-ITQERLMDSAMSVGHSPDCAAFITLASKALPKYRAIMG----P 402

  Fly   369 FRGKLWGVIIVILLLAVLSTCWLRSRLGLSH------PIEDLLTVIVGNPIPDHRLPG------- 420
            |:..:|..:|.:.|..:....: ..||.|||      .:|::...:.|.........|       
  Fly   403 FQWPVWVALICVYLGGIFPIVF-TDRLTLSHLMGNWGEVENMFWYVFGMFTNAFSFTGKYSWSNT 466

  Fly   421 -KGFLRYLLASWMLLTLVLRCAYQARLFDVLRLSRHRPLPK------DLSGLIKDNYTMVANGYH 478
             |...|.|:.::.|.|:::...|...:...:.|.   ..|.      ||.||.....|:...|:.
  Fly   467 RKNSTRLLIGAYWLFTIIITSCYTGSIIAFVTLP---AFPDTVDSVLDLLGLFFRVGTLNNGGWE 528

  Fly   479 DFYPLELTCRQPLDFSARFERVQ-RAAPDERLTTIALISNLAYWNH-----------------KH 525
            .::  :.:...|.  |..::::: ..:.||   .|..::...:||:                 ..
  Fly   529 TWF--QNSTHIPT--SRLYKKMEFVGSVDE---GIGNVTQSFFWNYAFLGSKAQLEYLVQSNFSD 586

  Fly   526 PNISR---LTFVRQPIYMYHLVIYFPRRFFLRPAIDRKIKQLLSAGVMAHIER------------ 575
            .||||   |....:...::.:...|||....:..||..|.....:|::|.|..            
  Fly   587 ENISRRSALHLSEECFALFQIGFLFPRESVYKIKIDSMILLAQQSGLIAKINNEVSWVMQRSSSG 651

  Fly   576 RYMQYENK---RKVASNDPVLLRRITKSIMNGAYRIHGLVIVLATGMFILELLAGRSN 630
            |.:|..:.   |::...:    |::|.:...|.:.:..|...|.....:.|::.|.:|
  Fly   652 RLLQASSSNSLREIIQEE----RQLTTADTEGMFLLMALGYFLGATALVSEIVGGITN 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 12/54 (22%)
Ir21aNP_001097043.1 Periplasmic_Binding_Protein_Type_2 289..583 CDD:304360 62/316 (20%)
Lig_chan 407..662 CDD:278489 48/265 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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