DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir11a and GRID1

DIOPT Version :9

Sequence 1:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:433 Identity:90/433 - (20%)
Similarity:176/433 - (40%) Gaps:76/433 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 ASNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMPQEPSQIFGE--GNVS--GCFRQLADGTVSI 323
            |.|:....:...|...|:|..|||||.|:.::|  |.|...:|.  .|.|  |...:|......:
Human   453 AENILGQPKRYKGFSIDVLDALAKALGFKYEIY--QAPDGRYGHQLHNTSWNGMIGELISKRADL 515

  Fly   324 AIGGLSGSDKRRSLFSKSTVYHQSNFVMVVRRDRYLGRLGPLILPFRGKLW----------GVII 378
            ||..::.:.:|.|:...|..|...:..:::::......:..|..||...:|          ||:|
Human   516 AISAITITPERESVVDFSKRYMDYSVGILIKKPEEKISIFSLFAPFDFAVWACIAAAIPVVGVLI 580

  Fly   379 VIL--LLAVLSTCWLRSRLGLSHPIEDLLTVIVGNPIPDHRLPGKG-----FLRYLLASWMLLTL 436
            .:|  :.||.:....:.|...|..:...:.::.|..:   :..|:.     .:|.::.||.|.||
Human   581 FVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFV---QQGGESSVNSMAMRIVMGSWWLFTL 642

  Fly   437 VLRCAYQARLFDVLRLSR-HRPLP--KDLSGLIKDNY-TMVANGYHDFYPLELTCRQPLDFSARF 497
            ::..:|.|.|...|.:|| ..|:.  :|||..::.:| |:..:..::::..:.|  .||:..:.|
Human   643 IVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKGT--NPLEQDSTF 705

  Fly   498 ERVQR------------AAPDERLTTIALISNLAY-WNHKHPNISRL-------TFVRQPIYMYH 542
            ..:.|            ::|.|.:.. |...|.|: |:......:.|       |.:...|....
Human   706 AELWRTISKNGGADNCVSSPSEGIRK-AKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISSKG 769

  Fly   543 LVIYFPRRFFLRPAIDRKIKQLLSAGVMAHIERRYMQYENKRKVASNDPVLLRRITKSIMNG-AY 606
            ..|........|....::|.:|...|.:..:::::..:..:..:.|:        ..:..:| :.
Human   770 YGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTSH--------ASAQADGKSL 826

  Fly   607 RIH---GLVIVLATGMFILELLAGRSNGRLRRWMEW----VHQ 642
            ::|   |:..:||.|:.:..|:|.     |..|  |    .||
Human   827 KLHSFAGVFCILAIGLLLACLVAA-----LELW--WNSNRCHQ 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 10/53 (19%)
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436
PBP1_iGluR_delta_1 25..423 CDD:107387
ANF_receptor 41..400 CDD:279440
PBP2_iGluR_delta_1 436..806 CDD:270448 76/360 (21%)
Lig_chan 564..841 CDD:278489 54/290 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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