DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir11a and GRID1

DIOPT Version :10

Sequence 1:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:433 Identity:90/433 - (20%)
Similarity:176/433 - (40%) Gaps:76/433 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   263 ASNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMPQEPSQIFGE--GNVS--GCFRQLADGTVSI 323
            |.|:....:...|...|:|..|||||.|:.::|  |.|...:|.  .|.|  |...:|......:
Human   453 AENILGQPKRYKGFSIDVLDALAKALGFKYEIY--QAPDGRYGHQLHNTSWNGMIGELISKRADL 515

  Fly   324 AIGGLSGSDKRRSLFSKSTVYHQSNFVMVVRRDRYLGRLGPLILPFRGKLW----------GVII 378
            ||..::.:.:|.|:...|..|...:..:::::......:..|..||...:|          ||:|
Human   516 AISAITITPERESVVDFSKRYMDYSVGILIKKPEEKISIFSLFAPFDFAVWACIAAAIPVVGVLI 580

  Fly   379 VIL--LLAVLSTCWLRSRLGLSHPIEDLLTVIVGNPIPDHRLPGKG-----FLRYLLASWMLLTL 436
            .:|  :.||.:....:.|...|..:...:.::.|..:   :..|:.     .:|.::.||.|.||
Human   581 FVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFV---QQGGESSVNSMAMRIVMGSWWLFTL 642

  Fly   437 VLRCAYQARLFDVLRLSR-HRPLP--KDLSGLIKDNY-TMVANGYHDFYPLELTCRQPLDFSARF 497
            ::..:|.|.|...|.:|| ..|:.  :|||..::.:| |:..:..::::..:.|  .||:..:.|
Human   643 IVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKGT--NPLEQDSTF 705

  Fly   498 ERVQR------------AAPDERLTTIALISNLAY-WNHKHPNISRL-------TFVRQPIYMYH 542
            ..:.|            ::|.|.:.. |...|.|: |:......:.|       |.:...|....
Human   706 AELWRTISKNGGADNCVSSPSEGIRK-AKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISSKG 769

  Fly   543 LVIYFPRRFFLRPAIDRKIKQLLSAGVMAHIERRYMQYENKRKVASNDPVLLRRITKSIMNG-AY 606
            ..|........|....::|.:|...|.:..:::::..:..:..:.|:        ..:..:| :.
Human   770 YGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTSH--------ASAQADGKSL 826

  Fly   607 RIH---GLVIVLATGMFILELLAGRSNGRLRRWMEW----VHQ 642
            ::|   |:..:||.|:.:..|:|.     |..|  |    .||
Human   827 KLHSFAGVFCILAIGLLLACLVAA-----LELW--WNSNRCHQ 862

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir11aNP_572795.2 None
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436
PBP1_iGluR_delta_1 25..425 CDD:380615
PBP2_iGluR_delta_1 436..806 CDD:270448 76/360 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954
Blue background indicates that the domain is not in the aligned region.

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