DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir11a and Ir52c

DIOPT Version :9

Sequence 1:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster


Alignment Length:715 Identity:140/715 - (19%)
Similarity:246/715 - (34%) Gaps:235/715 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IWVVVRAQPTGRDVLLSRLGNQQNELNTRRLANASSYLTRNYIANRINTLVVREICVECPYELSE 85
            :|::         ::|..|||..:::..   ...:|:|..:|   |:..|:.| :.||..|:   
  Fly     2 VWLI---------IILFCLGNSSSQILD---VTNNSHLDFDY---RLFGLLQR-LQVEKSYD--- 47

  Fly    86 RQRQLV---DQILASLAPEL---SVLLHKGTAEETTWEYTLFVVNDHTAFTGQVFI----FPDEL 140
              ..||   |..:.||...|   :||:..|:   |.:::.         |:....|    |.|  
  Fly    48 --TLLVYGEDCAIPSLFERLQVPAVLVSSGS---TNFDWN---------FSSLTLILSCNFQD-- 96

  Fly   141 LEREFFCIVVVSEIQSRQFVRQTVGSIVKSNLQMHFV----------NVVVVA----QLEDGTVG 191
             |||.....::....||:.:      ::|.:::...|          ||.:|.    |||    .
  Fly    97 -EREENYRTLMKLQTSRRLI------LLKGHIKPESVCDFYSKKEQHNVAMVKENFYQLE----V 150

  Fly   192 TYSYKLF------KANCTPGITVRQINHFDRITGKPQQSMPDLYPVRNGHLGDCPFNVGAAHMPP 250
            .||.:||      |.|...|.::.: :.|..:.|.|.:::.|                       
  Fly   151 VYSCRLFQDQNYEKLNLFDGKSIYK-DQFRNMHGAPIRTLSD----------------------- 191

  Fly   251 HLIYKRHKDPPPASNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMPQEPSQIFGEGNVSGCFRQ 315
                   |:||.    :||..|            :|..:.:.:.|:....||...:.|.:...|:
  Fly   192 -------KEPPR----TIPYID------------SKTGEEKFKGYVGMLISQFVKKVNATMQIRE 233

  Fly   316 ---LADGTVS-IAIGGLSGSD-------KRRSLFSKSTVYHQSNFVMVVRRDRYLGRLGPLILPF 369
               ..|..|| :.|...:.:|       :.|:|  :.:.|...::..::....::..| |..|||
  Fly   234 DLIKDDEEVSFVDITNFTSNDILDIGICEARTL--EMSNYDAISYPYLMSSYCFMAPL-PDSLPF 295

  Fly   370 RGKLWGVI---IVILLLAVLSTC-----WLRSRLGLSHPIEDL------LTVIVGNPIPDHRLPG 420
            ......::   |:|:.|.:...|     :::.|...|..|..:      |...:..|.|..|   
  Fly   296 SDVYMAIVAPSILIMFLIIFCICSVLIIYIQERSYRSLTIRSVLMNDICLRGFLAQPFPFPR--- 357

  Fly   421 KGFLRYLLASWMLL---TLVLRCAYQARLFDVLRLSRHRPLPKDLSGLIKDNYTMVANGYHDFYP 482
             .:.|.|...:||:   :|:....|.|.|...|......|.......:.|..|||..|.|...: 
  Fly   358 -QYNRKLKLIFMLVCFSSLISTTMYTAYLQAFLWGPPIEPRLTSFDDVKKSRYTMAINIYEREF- 420

  Fly   483 LELTCRQPLDFSARFERVQRAAPDERLTTIALISNLA---YWNHKHPNISRLTFV---RQPIYMY 541
                          .|.:..:..|..:......|.|.   ..|:..|..:...|.   .|.::.|
  Fly   421 --------------LEALNVSLEDVEIYDYGKFSKLRSTFNTNYLFPVTALQWFTINEEQKLFKY 471

  Fly   542 HLVIYFPRRFFLRPAIDRKIKQLLSAGVMAHIERRYMQYENKRKVASNDPVLLRR---ITKSIMN 603
            . :.|:...|.|...      .:||..:..|:..|.:..|:         :||::   :||..::
  Fly   472 K-IFYYCDAFCLNQF------DILSIPLRRHLPYRDIFEEH---------MLLQKEFGLTKYWID 520

  Fly   604 GAYR-----------------------IHGLVIV-----LATGM----FILELLAGRSNGRLRRW 636
            .:||                       :|.|..|     :..||    ||||:|.     .||.|
  Fly   521 QSYRDMIRANLTTFKDFSPLLENDYIEVHNLYWVFTMYFVGMGMGLCFFILEILR-----PLRYW 580

  Fly   637  636
              Fly   581  580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 10/60 (17%)
Ir52cNP_725470.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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