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Protein Alignment Ir11a and Grin2a
DIOPT Version :9
| Sequence 1: | NP_572795.2 |
Gene: | Ir11a / 32189 |
FlyBaseID: | FBgn0030385 |
Length: | 642 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_036705.3 |
Gene: | Grin2a / 24409 |
RGDID: | 2737 |
Length: | 1464 |
Species: | Rattus norvegicus |
| Alignment Length: | |
Identity: | / - (0%) |
| Similarity: | / - (0%) |
Gaps: | / - (0%) |
- Green bases have known domain annotations that are detailed below.
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Ir11a | NP_572795.2 |
Periplasmic_Binding_Protein_Type_2 |
306..>356 |
CDD:304360 |
|
| Grin2a | NP_036705.3 |
PBP1_iGluR_NMDA_NR2 |
32..392 |
CDD:107373 |
|
| PBP2_iGluR_NMDA_Nr2 |
403..802 |
CDD:270436 |
|
| HisJ |
<458..>541 |
CDD:223904 |
|
| Glutamate binding. /evidence=ECO:0000269|PubMed:16281028, ECO:0007744|PDB:2A5S, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF4, ECO:0007744|PDB:4NF8, ECO:0007744|PDB:5I56, ECO:0007744|PDB:5I57, ECO:0007744|PDB:5I58, ECO:0007744|PDB:5I59, ECO:0007744|PDB:5JTY |
511..513 |
|
|
| Lig_chan |
556..828 |
CDD:278489 |
|
| Pore-forming. /evidence=ECO:0000250|UniProtKB:B7ZSK1 |
599..620 |
|
|
| Glutamate binding. /evidence=ECO:0000269|PubMed:16281028, ECO:0000269|PubMed:24462099, ECO:0007744|PDB:2A5S, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF4, ECO:0007744|PDB:4NF8 |
689..690 |
|
|
| Glutamate binding. /evidence=ECO:0000269|PubMed:16281028, ECO:0000269|PubMed:24462099, ECO:0007744|PDB:2A5S, ECO:0007744|PDB:2A5T, ECO:0007744|PDB:4NF4, ECO:0007744|PDB:4NF8 |
730..731 |
|
|
| NMDAR2_C |
839..1464 |
CDD:287527 |
|
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite |
989..1083 |
|
|
| PDZ-binding. /evidence=ECO:0000305 |
1462..1464 |
|
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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