DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir11a and glr-8

DIOPT Version :10

Sequence 1:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:483 Identity:96/483 - (19%)
Similarity:181/483 - (37%) Gaps:87/483 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 TVRQINHF-----DRITGKPQQSMP----DLYPVRN-GHL------GDCPFNVGAAHMPPHLIYK 255
            ::|.:|:.     :::...||.|:.    |.|.:.| .|.      |.....|..|..||::.|.
 Worm    15 SIRTLNNILESINEKVAHPPQTSLTSDYGDAYTLSNEKHFSLSEMKGRTLKMVVPAIEPPYVNYV 79

  Fly   256 RHKDPPPASNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMPQEPSQIFGE---GNVSGCFRQLA 317
            ...|.........|     |:..::|:.:.|.|....:: :|...| .:||   |:.:|.|.||.
 Worm    80 NFSDAAVTDKGYGP-----GVVMEILKEIGKRLNLTYEI-LPALGS-TWGEYLNGSWTGAFGQLV 137

  Fly   318 DGTVSIAIGGLSGSDKRRSLFSKSTVYHQ--SNFVMVVRRDRYLGRLGPLIL---PFRGKLWGVI 377
            .|.|.:..|| :..:..||:.:..|...|  ...:|:...::|  ....|::   ||..::|.:.
 Worm   138 RGEVDLLAGG-AIMEYDRSVIADLTYPFQFEPTGIMIRSPEKY--EDDTLLIVTEPFSWEVWVIT 199

  Fly   378 IVILLLA----VLSTCWLR---SRLGLSHPIEDL---LTVIVGNPIPDHRLPGKGFLRYLLASWM 432
            ..::|::    ::.|..:|   ..:.:: |.|.:   .::.|...:|:.  |.....|.|:|.|.
 Worm   200 AAVILISGVIFLVMTNIIRKVYEEMTVT-PFESIWVFFSIFVQQGLPEQ--PRSWSCRVLVALWW 261

  Fly   433 LLTLVLRCAYQARLFDVLRLSRHRPLP----KDLSGLIKDNYTMVANGYHDFYPLELTCRQPL-- 491
            |.::.|...:...|..:..:.:.. :|    ..|..|:|.....:....:.|...|:..|..|  
 Worm   262 LASITLSATFTGSLVALFAVDKTN-VPFQNIDQLVRLVKQGKFEIVMDENSFTRTEMIARSKLPV 325

  Fly   492 -----------------DFSARFERVQRAAPDERLTTIALISNLAYWNHKHPNISRLTFVRQPIY 539
                             :..||.....||.|.     .||:..:|..|....:..::......|.
 Worm   326 YRDLWHEMIVNHKVKYVNGIARGVAFVRANPG-----YALLGPMATLNFYAYSDCKVILFNDGIL 385

  Fly   540 MYHLVIYFPRRFFLRPAIDRKIKQLLSAGVMAHIERRYMQYENKRKVASNDPVLLRRITKSIMN- 603
            ..:|.|...:.....|....||::::..|........|..|...:|:...:...:.  .||.:: 
 Worm   386 PVYLSIPLVKNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINECNSTTIG--PKSYLDL 448

  Fly   604 ----GAYRIH----GLVIVLATGMFILE 623
                ||:.:.    ||.:.|..|.||.:
 Worm   449 KRAQGAFWVFLGGAGLGLALFVGEFIFK 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir11aNP_572795.2 None
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 73/380 (19%)

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