DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir11a and glr-8

DIOPT Version :9

Sequence 1:NP_572795.2 Gene:Ir11a / 32189 FlyBaseID:FBgn0030385 Length:642 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:483 Identity:96/483 - (19%)
Similarity:181/483 - (37%) Gaps:87/483 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 TVRQINHF-----DRITGKPQQSMP----DLYPVRN-GHL------GDCPFNVGAAHMPPHLIYK 255
            ::|.:|:.     :::...||.|:.    |.|.:.| .|.      |.....|..|..||::.|.
 Worm    15 SIRTLNNILESINEKVAHPPQTSLTSDYGDAYTLSNEKHFSLSEMKGRTLKMVVPAIEPPYVNYV 79

  Fly   256 RHKDPPPASNVSIPAEDLAGIDWDLLQLLAKALKFRIQLYMPQEPSQIFGE---GNVSGCFRQLA 317
            ...|.........|     |:..::|:.:.|.|....:: :|...| .:||   |:.:|.|.||.
 Worm    80 NFSDAAVTDKGYGP-----GVVMEILKEIGKRLNLTYEI-LPALGS-TWGEYLNGSWTGAFGQLV 137

  Fly   318 DGTVSIAIGGLSGSDKRRSLFSKSTVYHQ--SNFVMVVRRDRYLGRLGPLIL---PFRGKLWGVI 377
            .|.|.:..|| :..:..||:.:..|...|  ...:|:...::|  ....|::   ||..::|.:.
 Worm   138 RGEVDLLAGG-AIMEYDRSVIADLTYPFQFEPTGIMIRSPEKY--EDDTLLIVTEPFSWEVWVIT 199

  Fly   378 IVILLLA----VLSTCWLR---SRLGLSHPIEDL---LTVIVGNPIPDHRLPGKGFLRYLLASWM 432
            ..::|::    ::.|..:|   ..:.:: |.|.:   .::.|...:|:.  |.....|.|:|.|.
 Worm   200 AAVILISGVIFLVMTNIIRKVYEEMTVT-PFESIWVFFSIFVQQGLPEQ--PRSWSCRVLVALWW 261

  Fly   433 LLTLVLRCAYQARLFDVLRLSRHRPLP----KDLSGLIKDNYTMVANGYHDFYPLELTCRQPL-- 491
            |.::.|...:...|..:..:.:.. :|    ..|..|:|.....:....:.|...|:..|..|  
 Worm   262 LASITLSATFTGSLVALFAVDKTN-VPFQNIDQLVRLVKQGKFEIVMDENSFTRTEMIARSKLPV 325

  Fly   492 -----------------DFSARFERVQRAAPDERLTTIALISNLAYWNHKHPNISRLTFVRQPIY 539
                             :..||.....||.|.     .||:..:|..|....:..::......|.
 Worm   326 YRDLWHEMIVNHKVKYVNGIARGVAFVRANPG-----YALLGPMATLNFYAYSDCKVILFNDGIL 385

  Fly   540 MYHLVIYFPRRFFLRPAIDRKIKQLLSAGVMAHIERRYMQYENKRKVASNDPVLLRRITKSIMN- 603
            ..:|.|...:.....|....||::::..|........|..|...:|:...:...:.  .||.:: 
 Worm   386 PVYLSIPLVKNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINECNSTTIG--PKSYLDL 448

  Fly   604 ----GAYRIH----GLVIVLATGMFILE 623
                ||:.:.    ||.:.|..|.||.:
 Worm   449 KRAQGAFWVFLGGAGLGLALFVGEFIFK 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir11aNP_572795.2 Periplasmic_Binding_Protein_Type_2 306..>356 CDD:304360 15/54 (28%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 73/380 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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