DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ten-a and Itgbl1

DIOPT Version :10

Sequence 1:NP_001162732.2 Gene:Ten-a / 32183 FlyBaseID:FBgn0267001 Length:3387 Species:Drosophila melanogaster
Sequence 2:NP_001017505.1 Gene:Itgbl1 / 498564 RGDID:1560635 Length:494 Species:Rattus norvegicus


Alignment Length:358 Identity:113/358 - (31%)
Similarity:148/358 - (41%) Gaps:106/358 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   934 CPND----CSGRGSCYLGKCDC--IDGY-----QGVDCSKSVC-----PVLCSAHGHYGGGVCHC 982
            |.|.    ||..|:|:.|:|.|  .||:     :..:|....|     ..:|..||....|.|:|
  Rat   143 CKNSQDVICSNAGTCHCGRCKCDNSDGHGLIYGKFCECDDRECIDDETEEICGGHGKCYCGNCYC 207

  Fly   983 EEGWKG----AECDIPVGE----CEVPN---CSSHGRCIEGECHCE-----RGWKGPY-----CD 1026
            |.||.|    .:|||...|    |..|:   ||:.|.|:.|||.|.     ..|...:     ||
  Rat   208 EAGWHGDKCEFQCDITPWESKRRCTSPDGKVCSNRGTCVCGECSCHDVDPTGDWGDIHGDTCECD 272

  Fly  1027 QHDC-------LDPLCSGHGTCVAGQCYCKAGWQGEDCG-------TIDQQVYQC-----LPGCS 1072
            :.||       .|..|||||.|..|:|.|:|||.|:.|.       :.::...:|     || ||
  Rat   273 ERDCRAVYDRYSDDFCSGHGQCNCGRCDCRAGWYGKKCEHPKNCPLSAEESTRKCQGSSDLP-CS 336

  Fly  1073 EHGTYDLETGQCVC----ERHWTGP--DCSQAVC-SLD---CGRNGVCESGKCRCNSGWTGNLCD 1127
            ..|.  .|.|:|.|    :....|.  :|....| .||   ||..|.|..|:|.|..||.|.|| 
  Rat   337 GRGR--CECGRCTCYPPGDSRVYGKTCECDDRRCEDLDGVVCGGRGTCSCGRCVCEKGWFGKLC- 398

  Fly  1128 QLP-------------CDSR----CSEHGQCKNGTCVCS-QGW--NGRHCTLPGCEN-GCSRH-- 1169
            |.|             |:|.    ||..|.|..|.|:|| :.|  :|..|   .|:: .|.:|  
  Rat   399 QHPRKCNMTEEQSRSLCESADGTLCSGKGSCHCGKCICSGEEWYISGEFC---DCDDRDCDKHDG 460

  Fly  1170 ------GQCTLENGEYRCDCIEGWAGRDCSIAL 1196
                  |.|:..|    |:|.:||.|..|.|.|
  Rat   461 LICTGNGICSCGN----CECWDGWNGNACEIWL 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ten-aNP_001162732.2 acid_disulf_rpt 1199..1225 CDD:411265
NHL 1622..1927 CDD:302697
NHL repeat 1675..1721 CDD:271320
NHL repeat 1745..1787 CDD:271320
NHL repeat 1802..1847 CDD:271320
NHL repeat 1864..1897 CDD:271320
RHS_core <2118..>2248 CDD:469161
RhsA <2366..3015 CDD:442442
Tox-GHH 3272..3349 CDD:464783
EGF_2 937..960 CDD:400365 9/33 (27%)
EGF_2 1003..1025 CDD:400365 9/31 (29%)
EGF_2 1034..1057 CDD:400365 13/22 (59%)
C_rich_MXAN6577 <1035..1146 CDD:469225 50/149 (34%)
EGF_CA 1163..1192 CDD:238011 10/37 (27%)
Itgbl1NP_001017505.1 Cysteine-rich tandem repeats 51..494 113/358 (32%)
Blue background indicates that the domain is not in the aligned region.

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