DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ten-a and Tnn

DIOPT Version :9

Sequence 1:NP_001162732.2 Gene:Ten-a / 32183 FlyBaseID:FBgn0267001 Length:3387 Species:Drosophila melanogaster
Sequence 2:NP_001100659.2 Gene:Tnn / 304913 RGDID:1306002 Length:1562 Species:Rattus norvegicus


Alignment Length:1902 Identity:372/1902 - (19%)
Similarity:594/1902 - (31%) Gaps:646/1902 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   791 FIKGGRLDSHLRHRRSSANATTTG---QDMEL-----YRQDKDQSA--ESAQDQDSEQDESRSF- 844
            |..|..|.|.|....:.||..|.|   :|.::     |:.|..:||  :...|..|..|:..|. 
  Rat     9 FPLGFLLASALLVASAPANPETPGCSHKDQQVTVSHTYKIDVPKSALVQVETDPQSLSDDGTSLL 73

  Fly   845 ----DSSESYDVETPLDTAKQHLQRIGKPQSHWVNKRSAGDGLPALDVDAMTVNVSLLQYLDTGL 905
                |..|.       :...:|..|:..||.                      |..|...:    
  Rat    74 VPGEDGEEQ-------NIIFRHNIRLQTPQK----------------------NCELADSV---- 105

  Fly   906 WFISVYNDELVAHSVSLLAEEAEGVSTTCPNDCSGRGSCYLGKCDCIDGYQG-VDCSKSVCPVLC 969
                   .:|:|....|..|.||     ....||....|           || .|.|:.     |
  Rat   106 -------QDLLARVKKLEEEMAE-----LKEQCSTSRCC-----------QGAADLSRH-----C 142

  Fly   970 SAHGHYGGGV--CHCEEGWKGAECDIPVGECEVPN-CSSHGRCIEGECHCERGWKGPYCDQHDCL 1031
            |.||.:....  |||::||:||:|:.|.  |  |. ||.||||::|:|.|::.:.|..|....|.
  Rat   143 SGHGTFFAETCSCHCDQGWEGADCEQPT--C--PGACSGHGRCVDGQCVCDQPYVGVDCAYAACP 203

  Fly  1032 DPLCSGHGTCVAGQCYCKAGWQGEDCGTIDQQVYQCLPGCSEHGTYDLETGQCVCERHWTGPDCS 1096
            .. |||||.||.|.|.                                      |.:.:|..|||
  Rat   204 QD-CSGHGVCVRGVCQ--------------------------------------CHKDFTAEDCS 229

  Fly  1097 QAVCSLDCGRNGVCESGKCRCNSGWTGNLCDQLPCDSRCSEHGQCKNGTCVCSQGWNGRHCTLPG 1161
            :..|..||..||.|::|:|.|..|:||..|.|:                 |..||..    .|..
  Rat   230 EQRCPGDCSGNGFCDTGECYCEMGFTGPDCSQV-----------------VAPQGLQ----LLKS 273

  Fly  1162 CENGCSRHGQCTLENGEYRCDCIEGWAGRDCSIALELNCKDNIDNDGDGMTDCSDSECCSHPACS 1226
            .||......:.:.|...|......  .|::.:.......|:....|..|:.          |. :
  Rat   274 TENSLLVSWEPSSEVDHYLLSYYP--LGKEQATKQVRVPKEQHTYDITGLL----------PG-T 325

  Fly  1227 EHIMCLSSNDPVEVLLRKQPPSVTASFYQRVKFLIEENSVQSYAHMDEYSE---NLFWSS----- 1283
            ::|:.|.:   |:..:...|..:.|:         .:.:|...|.::|.:|   ::.|.:     
  Rat   326 KYIVTLRN---VKKDISSSPQHLLAT---------TDLAVVGTAWVNEETETSLDVEWENPLTEV 378

  Fly  1284 -FTPCRVSVMRGQVITPQGLGIVGIRVSVDRDSRFGFTLTRQGGWF--------------DVLVN 1333
             :...|...:.||.:|.     |.:..|.|..||:..|..:.|..:              .:|:|
  Rat   379 DYYKLRYGPLTGQEVTE-----VTVPKSRDPKSRYDITGLQPGTEYKITVVPIRGDLEGKPILLN 438

  Fly  1334 GGGAVTLQFQRSPFRPLTR-----TVFVPWN--RIVVLPPVQMQLSDDDETTSRNIKVAPLNPAL 1391
            |...:.     .|...:|.     |..|.|:  |..:...|...:|.|.||..   |..|.:.:.
  Rat   439 GRTEID-----GPTNVVTNQVTEDTASVSWDPVRADIDKYVVRYISHDGETKE---KAVPKDQSS 495

  Fly  1392 TFLNSIH-------YHTADEANDASKVCMDHDHEKL----RPQLIST-----------WMPNGVG 1434
            |.|..:.       :..|:..|..||..   |.:.|    .|:.:.|           |.|  |.
  Rat   496 TVLTGLKPGEAYKVFVWAERGNQGSKKA---DTKALTEIDSPENLVTDRVTENSLSVSWDP--VE 555

  Fly  1435 AMPGKRVIFAETQIVQESIQIPGSDLHLTYQSSQASGYLSIVRMRLTGETIPPTLTHVHVGVEIE 1499
            |...:.|: :.|.:..|:.|:|       .:..|:|                ..||.:..|||.:
  Rat   556 AEIDRYVV-SYTSVDGETKQVP-------VRKDQSS----------------TVLTGLSPGVEYK 596

  Fly  1500 GALHVKTYEADPSLVHTFA----WNKRNVYRQKVYGVTVARISVGYQHSTCQSPVWIAQTAKLQG 1560
            ..:..:..:.:....:|.|    .:.:|:...:   ||...:||.          |....|.:..
  Rat   597 VYVWAEKGDRESKKANTKAPTDIDSPKNLVTDQ---VTENTLSVS----------WDPVQANIDR 648

  Fly  1561 YDVDISDIGG----------------WGLDIHHHYNFHEGILQKGDGSTLHMKEYPRTVKVVMGT 1609
            |.|..:...|                .||.....|..|.. .|||       .:..|.......|
  Rat   649 YMVSYTSADGETREVPVPKEKSSTVLTGLRPGMEYKVHVW-AQKG-------TQESRKANTKAPT 705

  Fly  1610 GLQRPLTCPDYCNGVAKDAKLLTPIALATGP-DGSLYVGDFNLVRRITPDG----------KVYT 1663
            .:..|       ..:..|....|.::::..| :..:   |..:||..:|||          |..|
  Rat   706 DIDGP-------KNLVTDQVTETTLSVSWDPVEADI---DRYMVRYTSPDGETKEVPVSKDKSST 760

  Fly  1664 ILQLSATQVSYQYYL-------------AVSPADGHLYISDPERHQILRLVRLEKVKD--PSINS 1713
            :|:.....|.|:..:             ..:|.|    |..|:     .|| .|:|.:  .:::.
  Rat   761 VLRGLRPGVEYKVDVWAQKGAQDSRKANTKAPTD----IDSPK-----NLV-TEQVTESTATVSW 815

  Fly  1714 DPVVGSGQRCIPGDEGNCGDGGPALLARLSHPKG----LAIAADRTMYIADGTNIRAVDPKGVIH 1774
            |||.....|.:               .|.:...|    ..:..|:|..|..|..      .||.:
  Rat   816 DPVEADIDRYV---------------VRYTSVDGETREFLVGKDQTSTILTGMK------PGVEY 859

  Fly  1775 TLIGHHGHHNHWSPAPCSGTLMANQAQLQWPTGLALSPLDGSLHFID------------------ 1821
            .:       :.|:.   .||..:.:...:.||     .:||..:.:.                  
  Rat   860 QV-------DVWAQ---KGTRESRKTSTKAPT-----DIDGPKNLVTDQVTETTLSVSWDPVEAD 909

  Fly  1822 -DRLVLRLTS------------DMKIRVVAG--------TPLHCSNGGQDGRVNKTGA------- 1858
             ||.::|.||            |....|:.|        ..:....|.||.|...|.|       
  Rat   910 IDRYMVRYTSPDGETKEVPVSKDKSSTVLRGLRPGVEYKVDVWAQKGAQDSRKANTKAPTDIDSP 974

  Fly  1859 -----DNVLGTVLAMAFSPFGNLYIADSDSRRVNSIRVVDTAGNMRYF-AGKQEGTGSQTCDCAI 1917
                 :.|..|.|::::.|..    ||.| |.|  :|.....|..:.| .||::.:      ..:
  Rat   975 KNLAINQVTETTLSVSWDPVQ----ADID-RYV--VRYTSADGESKEFLIGKEQRS------TVL 1026

  Fly  1918 GGGSNGSATNSGVGGAGGSAYSTTVNPTRPNGGTTPTTPSGGNGNGNGNGSSATSSGGSV----- 1977
            .|...|......|....|:..|...|   ..|.|...:|.....| ....::||.|...|     
  Rat  1027 TGLRPGVEYKVEVWAQKGARESKKAN---TKGHTDIDSPKNLVTN-QVTENTATISWDPVQADID 1087

  Fly  1978 ----------GGSNGSGGGANGGACICAG---GIALSTGTGSSSG---SNGGGTLA-SIVGSGGL 2025
                      |.:..........:.:..|   |:..:....:..|   |....|.| :.:.|...
  Rat  1088 RYMVRYTSADGETREVPVRKEKSSTVLTGLRPGVEYTVQVWAQKGARESRKAKTKAPTEIDSPKN 1152

  Fly  2026 MSTGPTTTTTVLLGAKTTAAGIGAATLNDDGTLSNAETLLSSNARFQAISAIAVAQDGVINVADQ 2090
            :.|...|..|..:......|.|....:.  .|.::.||.....::.|:.:.:...:.|:     :
  Rat  1153 LVTNRVTENTATISWDPVRATIDRYMVR--YTSADGETKEVPVSKDQSSTILTGLKPGM-----E 1210

  Fly  2091 GSLHVLALE----------HYLPSHDENGEFHIPF------------PPSSEI--YV-------- 2123
            .::||.|.:          ..|...|....|. ||            |||::|  |:        
  Rat  1211 YTIHVWAQKGARESKKADTKALTEIDPPKNFR-PFGVTHSSGVLTWMPPSAQIDGYILTYQLPNG 1274

  Fly  2124 ------FNRYGQHVATKDLTSGKTRYSFLYSKNTSFGRLSTVTDASGNKIQFLRDYSNVVSSIEN 2182
                  ..|..|....:||..|.| |..            ::....||  |..|..|..:|:::.
  Rat  1275 ILKEVELQRGQQRFELQDLEQGVT-YPV------------SLVAFKGN--QRSRSVSTTLSTVDA 1324

  Fly  2183 TQDHK---SEIQINGIGIMTKLSEKGRQEIELDYDSNTGL---LNSRSSGGETYIY------QYD 2235
            ...|.   |::|.|     |..:..|...|.|:.|::..:   .:..:.||...::      |.|
  Rat  1325 RFPHPSDCSQVQQN-----TNAAASGLYTIYLNGDASRPMQVYCDMDTDGGGWIVFQRRNTGQLD 1384

  Fly  2236 EFGR----VTGMILPSGEI-------------------VRITSQLADSQGLTVYVHASVESLFSR 2277
            .|.|    |.|...|..|.                   ||...|.|:.....||....|.|  |:
  Rat  1385 FFKRWRSYVEGFGDPMKEFWLGLDKLHNLTTGTTTRYEVRADLQTANESAYAVYDFFQVAS--SK 1447

  Fly  2278 ERIAGEANELLVLGGVRSTFLKRGQAHADAELKANNTLVIHG---------DNGVVVEASAVARH 2333
            ||..      |.:|..|.|              |.:.|..|.         ||.:.:...|:..|
  Rat  1448 ERYK------LSVGKYRGT--------------AGDALTYHNGWKFTTFDRDNDIALSNCALTHH 1492

  Fly  2334 PLLEAALPVEAEMLAMWSHQSVTMGEGLTNSMYSVYSLVGDVRNPQQTLNREIWVNQS------- 2391
                          ..|.:::..:..  .|..|      |:.:: .:.:|.|.|....       
  Rat  1493 --------------GGWWYKNCHLAN--PNGKY------GETKH-SEGVNWEPWKGHEFSIPYVE 1534

  Fly  2392 ---RVIGVEFDQFTNRE 2405
               |..|...|:|:.|:
  Rat  1535 LKIRPFGYSRDRFSGRK 1551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ten-aNP_001162732.2 EGF_2 934..960 CDD:285248 5/26 (19%)
Keratin_B2 998..1162 CDD:279797 46/164 (28%)
EGF_2 <1003..1025 CDD:285248 10/21 (48%)
EGF_2 1032..1057 CDD:285248 9/24 (38%)
EGF_2 <1071..1095 CDD:285248 2/23 (9%)
EGF_2 1101..1126 CDD:285248 11/24 (46%)
EGF_2 <1135..1157 CDD:285248 3/21 (14%)
EGF_CA 1163..1192 CDD:238011 5/28 (18%)
NHL 1622..1927 CDD:302697 71/386 (18%)
NHL repeat 1675..1721 CDD:271320 11/60 (18%)
NHL repeat 1745..1787 CDD:271320 7/45 (16%)
NHL repeat 1802..1847 CDD:271320 12/83 (14%)
NHL repeat 1864..1897 CDD:271320 9/32 (28%)
RHS_repeat 2213..2250 CDD:283287 10/49 (20%)
RhsA 2397..2958 CDD:225750 3/9 (33%)
Rhs_assc_core 2939..3015 CDD:274730
Tox-GHH 3274..3349 CDD:292269
TnnNP_001100659.2 EGF_2 <142..166 CDD:285248 11/23 (48%)
EGF_2 169..197 CDD:285248 13/31 (42%)
EB 181..233 CDD:279949 21/90 (23%)
EGF_2 233..259 CDD:285248 12/25 (48%)
fn3 264..332 CDD:278470 13/84 (15%)
fn3 359..434 CDD:278470 14/79 (18%)
fn3 444..521 CDD:278470 17/84 (20%)
FN3 532..608 CDD:214495 18/101 (18%)
FN3 620..696 CDD:214495 17/96 (18%)
fn3 708..785 CDD:278470 15/86 (17%)
fn3 796..875 CDD:278470 20/115 (17%)
fn3 884..961 CDD:278470 13/76 (17%)
fn3 972..1049 CDD:278470 18/89 (20%)
FN3 1060..1136 CDD:214495 10/76 (13%)
FN3 1148..1224 CDD:214495 14/82 (17%)
fn3 1236..1313 CDD:278470 19/92 (21%)
FReD 1327..1540 CDD:238040 49/262 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1225
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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