DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ten-a and tnr

DIOPT Version :9

Sequence 1:NP_001162732.2 Gene:Ten-a / 32183 FlyBaseID:FBgn0267001 Length:3387 Species:Drosophila melanogaster
Sequence 2:NP_001107287.1 Gene:tnr / 100135076 XenbaseID:XB-GENE-948286 Length:1350 Species:Xenopus tropicalis


Alignment Length:1184 Identity:252/1184 - (21%)
Similarity:379/1184 - (32%) Gaps:395/1184 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1025 CDQHDCLD----------PLCSGHGTCVAGQCYCKAGWQGEDCGTIDQQVYQCLPGCSEHGTYDL 1079
            |:...|.|          |.|||||......|.|..||.||:|..     ..|...||..||. :
 Frog   150 CNDRACQDAEATGLTEFAPPCSGHGNFTVDSCICNQGWGGENCSE-----PLCPLECSGRGTC-I 208

  Fly  1080 ETGQCVCERHWTGPDCSQAVCSLDCGRNGVCESGKCRCNSGWTGNLCDQLPCDSRCSEHGQCKNG 1144
            | |.||||..:||..|:..:|..:|..:|:|:.|:|.|...:.|..|.:|.|...|...|:|.||
 Frog   209 E-GMCVCEPDYTGEWCTDLLCPEECSPHGLCQDGQCVCQDPYIGIGCTELRCPGDCLGKGRCANG 272

  Fly  1145 TCVCSQGWNGRHCTLPGCENGCSRHGQCTLENGEYRCDCIEGWAGRDCS-IALELNCK-----DN 1203
            ||||..|:.|..|....|.|.||..|||  ::|.  |:|.||::|:||| :|..::..     |:
 Frog   273 TCVCQDGYAGEDCGRMWCINACSGRGQC--QDGV--CECEEGYSGQDCSEVAPPVDFSVTAVGDH 333

  Fly  1204 -IDNDGDGMTDCSDSECCSHPA------CSEHIMCLSSNDPVEVLLRKQPPSVTASFYQRVKFLI 1261
             :|...:|.|..::......||      ..:.:......|...|.:|:..|.||        :.|
 Frog   334 WMDLAWEGTTAVTEYVISYQPAVPGEWGTQQRLQQRVPGDWSSVTIRELEPGVT--------YNI 390

  Fly  1262 EENSVQSYAHMDEYSENLFWSSFTPCRVSVMRGQVITPQGLGIVGI---RVSVDRDSRFGFTLTR 1323
            ...||.|    |..||        |..:::.. .:.:|:||..:.:   .|.|..|... |.|  
 Frog   391 SVCSVIS----DIISE--------PASITIST-HISSPRGLNFMEVTQTSVEVHWDPPV-FPL-- 439

  Fly  1324 QGGW---FDVLVNGGGAVTLQF----------------------------QRSP----------- 1346
             .||   |....|.|| :|:|.                            .|||           
 Frog   440 -DGWEISFTPKNNEGG-LTVQLPSSVTSFNQTGLKPGEEYTVSIISLKDQARSPATSGSISTDID 502

  Fly  1347 ------FRPLTRTV-FVPWNRIVVLPPVQ-----MQL------SDDDETTSRNIKVAPLNPALTF 1393
                  .|.:|.|| ||.|.      |.:     |||      .:.::||.|      |.|.|: 
 Frog   503 GPTNILVRDVTDTVAFVEWT------PARAKLDFMQLDYGPINGEGEKTTFR------LQPPLS- 554

  Fly  1394 LNSIHYHTADEANDASKVCMDHDHEKLRP---QLISTWMPNGVGAMPGKRVIFAETQIVQESIQI 1455
                                .:..:.|||   ..||.....|.......|..|.......:::::
 Frog   555 --------------------QYSMQVLRPGSQYEISIRGVRGDTESEPVRATFTTELDAPKNLRV 599

  Fly  1456 ---PGSDLHLTYQSSQASG--------------YLSIVRMRLTGETIPPTLTHVHVGVEIEGALH 1503
               ..|.|.|.:.:|:|.|              |..::..|..|:|...|||.:..|.|....:.
 Frog   600 ISHASSTLELEWDNSEAEGEGYRVVYSTLAGDQYHELIVPRNYGQTTKATLTDLIPGTEYGIGIS 664

  Fly  1504 VKTY--EADPSLVHTFAWNKRNVYRQ----KVYGVTVARISVGYQHSTCQSPVWIAQTAKLQGYD 1562
            ...|  ::.|:.:     |.|.....    .|.|.|...||:          .|......:..|.
 Frog   665 AIRYNLKSAPATM-----NARTELDSPTDLMVTGSTDKSISL----------TWTKARGPIDHYR 714

  Fly  1563 VDISDIGGWGLDIH-----HHYNFHEGILQKGDGSTLHM-----KEYPRTVKVVMGTGLQRPLT- 1616
            :..:...|...::.     ..|...|  |:.|...|:.:     ::..:...:...||. ||:| 
 Frog   715 ISFTPSSGMASEVTVPSDISQYELSE--LEPGTEYTISIFAERGRQQSKETTIDAFTGF-RPITQ 776

  Fly  1617 -----CPDYCNGVA-------KDAKLLT--------PIALATGPDGSLYVGDFNLVRRITPDGKV 1661
                 ...|...|:       .|..:||        |:.|...|.          :|:       
 Frog   777 LHFSAVTAYSVNVSWTDPSPPPDQFILTYNPIDSKDPLQLFLDPS----------LRQ------- 824

  Fly  1662 YTILQLSATQVSYQYYLAVSPADGHLYISDPERHQILRLVRLEKVKD-------PSINSDPVVGS 1719
               .:|||.|.|.:|.:.:.|..|              .||.|.|:.       |.::...:   
 Frog   825 ---TRLSALQPSTEYMVTLLPVHG--------------TVRAELVEGTVTTGVAPPMDLSVI--- 869

  Fly  1720 GQRCIPGDEGNCGDGGPALLAR-----LSH-------PKG----LAIAADRTMY----IADGTNI 1764
                      |..:...|::.|     |.|       .||    :.|..|:|.|    :...|..
 Frog   870 ----------NVTENSLAVVWRPPPSSLHHYRLTYQSTKGRMDSVVIGNDQTRYTLANLMPNTEY 924

  Fly  1765 R---------------------AVDPKGVIHTLIGHHGHHNHWSPAPCSGTLMANQAQLQW--PT 1806
            :                     ||||...:.|                 ..:.|.:|.|.|  |.
 Frog   925 KISLRSVRGREESERVGIVSWTAVDPPYGLRT-----------------SNITATEALLHWEPPR 972

  Fly  1807 GLALSPL--------DGSLHFIDDRLVLRLTSDMKIRVVAGTPLHCSNGGQDGRVNKTGAD---- 1859
            ....|.:        .|....:|...:.....::..|......|..:.|.|..|  ..|..    
 Frog   973 SEVESYVIIVTHHAGSGETILVDGESIEFQLQNLLPRTNYSVTLSANFGHQTSR--SVGVSFTTI 1035

  Fly  1860 -----NVLGTVLAMA---------FSPFGNLYIADSDSRRVNSIRVVDTAGNMRYFAGKQEGTGS 1910
                 |:..|.:|..         .||..|..:....:.......:||.........|..|.|..
 Frog  1036 LDPPMNLTATEVARTSALISWQPPISPIENYILTYKSANESRKELIVDAEDTWIRLEGLLESTEY 1100

  Fly  1911 QTCDCAIGGGSNGSATNSGVGGAGGSAYSTTVNPTRPNGGTTPTTPSGGNGNG------NGNGSS 1969
            .....::..|...|.|:: |...||..:|...:       ......:|.|.:|      ||:.|.
 Frog  1101 TVSILSVQNGERSSVTHT-VFTTGGRVFSYPQD-------CAQHMLNGDNQSGVYYIYINGDMSQ 1157

  Fly  1970 --------ATSSGG 1975
                    ||.:||
 Frog  1158 SVPVYCDMATDAGG 1171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ten-aNP_001162732.2 EGF_2 934..960 CDD:285248
Keratin_B2 998..1162 CDD:279797 53/146 (36%)
EGF_2 <1003..1025 CDD:285248 252/1184 (21%)
EGF_2 1032..1057 CDD:285248 13/34 (38%)
EGF_2 <1071..1095 CDD:285248 12/23 (52%)
EGF_2 1101..1126 CDD:285248 7/24 (29%)
EGF_2 <1135..1157 CDD:285248 11/21 (52%)
EGF_CA 1163..1192 CDD:238011 12/28 (43%)
NHL 1622..1927 CDD:302697 65/395 (16%)
NHL repeat 1675..1721 CDD:271320 8/52 (15%)
NHL repeat 1745..1787 CDD:271320 12/70 (17%)
NHL repeat 1802..1847 CDD:271320 8/54 (15%)
NHL repeat 1864..1897 CDD:271320 7/41 (17%)
RHS_repeat 2213..2250 CDD:283287
RhsA 2397..2958 CDD:225750
Rhs_assc_core 2939..3015 CDD:274730
Tox-GHH 3274..3349 CDD:292269
tnrNP_001107287.1 EGF_alliinase 153..196 CDD:282688 15/47 (32%)
EGF_2 198..223 CDD:285248 12/26 (46%)
EGF_2 260..285 CDD:285248 11/24 (46%)
EGF_2 292..316 CDD:285248 12/27 (44%)
FN3 321..410 CDD:238020 20/108 (19%)
fn3 413..493 CDD:278470 19/84 (23%)
fn3 502..582 CDD:278470 23/112 (21%)
FN3 592..676 CDD:238020 17/83 (20%)
fn3 684..763 CDD:278470 13/90 (14%)
fn3 773..840 CDD:278470 17/86 (20%)
fn3 862..939 CDD:278470 13/89 (15%)
fn3 949..1018 CDD:278470 13/85 (15%)
FN3 1037..1122 CDD:238020 15/85 (18%)
FReD 1129..1337 CDD:238040 10/50 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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