DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1924 and canx

DIOPT Version :9

Sequence 1:NP_572788.2 Gene:CG1924 / 32180 FlyBaseID:FBgn0030377 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001005668.1 Gene:canx / 448161 XenbaseID:XB-GENE-5735140 Length:606 Species:Xenopus tropicalis


Alignment Length:575 Identity:253/575 - (44%)
Similarity:343/575 - (59%) Gaps:65/575 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DSDLEWDDFEDVDVEDVQQEDVDE------------KPTYKSPVIDAKKFHFADHFDDMEASTRR 83
            |.|.:.|:.:.:|::| :.||.:|            |.|||:|| ...:.:|::.||  :.:...
 Frog    36 DHDHDHDEDDGLDIDD-ELEDPEELKPETSTPPPAPKVTYKAPV-PTGEVYFSESFD--KGTLDG 96

  Fly    84 WVLSQAKKDDIADEISKYDGIWNWEPPQRMVWANDLGLVLKSKAKHAAIAAHLHQPFDFKSEKPL 148
            |:||:|||||..:||:||||.|.....:......||||||.|:|||.|||:.:.:||.| .:|.|
 Frog    97 WILSKAKKDDTDEEIAKYDGKWEVLEMKDTKLPGDLGLVLMSRAKHHAIASKMKKPFVF-DKKSL 160

  Fly   149 VVQYEITIQKGQECGGSYLKLLSAGKETEQLQTFNDKTPYTIMFGPDKCGKDVTIHFIFKHVNPI 213
            :||||:..|.|.||||:|:||||...| ::.:.|:|||||||||||||||:|..:||||:|.||.
 Frog   161 IVQYEVNFQNGIECGGAYVKLLSKTPE-QKPEQFHDKTPYTIMFGPDKCGEDYKLHFIFRHKNPK 224

  Fly   214 NGTITEKHCNKPNNSFEEPFKDKLPHLYQLVVRPDNSFEIRIDHKIIKEGSLLTDFKPPVNPPAE 278
            .|...|||..:|:...:..|.||..|||.||:.|||||||.:|..::..|:||.|..||||||.|
 Frog   225 TGEYEEKHAKRPDADLKSYFTDKKTHLYTLVLNPDNSFEILVDQTVVNRGNLLNDVNPPVNPPNE 289

  Fly   279 IDDPNDHKPDSWDEREKIPDPTVHKPEDWDENETLKLPD-------------ADMIFDPTATKPE 330
            |:||.|.||:.||||.|||||...||:||||:...|:||             .:.|.||.|.|||
 Frog   290 IEDPEDKKPEDWDERPKIPDPDAVKPDDWDEDAPAKIPDENAVKPEGWLDDEPEYIPDPDAEKPE 354

  Fly   331 DWDDEIDGEWQAPMVDNPVCKKDQTCGI-----IRNPNYKGKWIAPMIDNPNYQGKWAPRKIANP 390
            |||:::||||:||.|.||.|:....||:     |.||:|||||..||||||||||.|.||||.||
 Frog   355 DWDEDMDGEWEAPQVANPKCESAPGCGVWQRPTIDNPSYKGKWKPPMIDNPNYQGIWKPRKIPNP 419

  Fly   391 DFFEDLKPFQMTPISAVGLELWSMSSDILFDNLIITDDVEVARDFAANSFDIKRRYIDRERDSIV 455
            ||||||:||:|||..|||||||||:|||.|||.|:|.:..||.|:|.:.:.:|:........|:|
 Frog   420 DFFEDLEPFRMTPFYAVGLELWSMTSDIFFDNFIVTSEKNVADDWANDGWGLKKAADGASAPSVV 484

  Fly   456 NKVVELVKDYPSIWAIGL--VAIVALVALTKCCRFGTTKIQESAAAESKKTDDPQP---HEPRPW 515
            .:::...::.|.:|.:.:  ||:...:.:..||    :..::...||.||||.|||   .|....
 Frog   485 GQMMAAAEERPWLWIVYILTVALPVFLVILFCC----SGKKQPLDAEHKKTDAPQPDVKEEEEED 545

  Fly   516 GSRMSRAKKWKLTIPPRRAYSCPLPPKKKLDDNEWKFKAAKKQKHTQTKESNTEE 570
            .....:|                    .|:::.|...::..||...:.:||..||
 Frog   546 EEEEGKA--------------------NKIEEEEDAEESEPKQDEAEDQESQEEE 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1924NP_572788.2 Calreticulin 70..425 CDD:278680 205/372 (55%)
canxNP_001005668.1 Calreticulin 85..454 CDD:306718 205/372 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 497 1.000 Domainoid score I359
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H1324
Inparanoid 1 1.050 567 1.000 Inparanoid score I1059
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D230478at33208
OrthoFinder 1 1.000 - - FOG0001260
OrthoInspector 1 1.000 - - mtm9512
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X875
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.060

Return to query results.
Submit another query.