DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1924 and cnx1

DIOPT Version :9

Sequence 1:NP_572788.2 Gene:CG1924 / 32180 FlyBaseID:FBgn0030377 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_001342872.1 Gene:cnx1 / 2543041 PomBaseID:SPAC3C7.11c Length:560 Species:Schizosaccharomyces pombe


Alignment Length:549 Identity:194/549 - (35%)
Similarity:277/549 - (50%) Gaps:105/549 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 QQEDVDEKPT-YKSPVIDAKKFHFADHFDDMEASTRRWVLSQAKKDDIADEISKYDGIWNWEP-- 109
            :||.:...|| .|:|:::  :|        ..|.:.||:.|.||:.....|...|.|.|..|.  
pombe    27 EQEPLVFNPTEVKAPLVE--QF--------QGAWSERWIPSHAKRFVNGIEEMSYVGEWTVEESS 81

  Fly   110 -PQRMVWANDLGLVLKSKAKHAAIAAHLHQPFDFKSEKPLVVQYEITIQKGQECGGSYLKLLSAG 173
             |..:  ..:.|||:|.:|.|.||:....:|.: :.||.||||||:..::|..|||:|||||:..
pombe    82 GPGAL--KGEAGLVMKDEAAHHAISYEFDEPIN-EPEKDLVVQYEVNPEEGLNCGGAYLKLLAEP 143

  Fly   174 KETEQLQTFNDKTPYTIMFGPDKCGKDVTIHFIFKHVNPINGTITEKHCNKPNNSFEEPFKDKLP 238
            ...|    .::...|.|||||||||.:..:||||||.||:.|..:|||.:....|..:|   .:.
pombe   144 THGE----MSNSIDYRIMFGPDKCGVNDRVHFIFKHKNPLTGEYSEKHLDSRPASLLKP---GIT 201

  Fly   239 HLYQLVVRPDNSFEIRIDHKIIKEGSLLTDFKPPVNPPAEIDDPNDHKPDSWDEREKIPDPTVHK 303
            :||.|:|:||.:||:||:..::::|||..||.|||.||.||.||.|.||..|.:..:||||...|
pombe   202 NLYTLIVKPDQTFEVRINGDVVRQGSLFYDFIPPVLPPVEIYDPEDIKPADWVDEPEIPDPNAVK 266

  Fly   304 PEDWDENETLKLPDAD-------------MIFDPTATKPEDWDDEIDGEWQAPMVDNPVCKKDQT 355
            |:||||:....:||.|             .|.||.|.||||||||.||:|....:.||.|.:...
pombe   267 PDDWDEDAPRMIPDPDAVKPEDWLEDEPLYIPDPEAQKPEDWDDEEDGDWIPSEIINPKCIEGAG 331

  Fly   356 CG-----IIRNPNYKGKWIAPMIDNPNYQGKWAPRKIANPDFFEDLKPFQMTPISAVGLELWSMS 415
            ||     :||||||:|.|..|||.||.:.|:|.||||.|||:|:|..|....|:..||.|||:|.
pombe   332 CGEWKPPMIRNPNYRGPWSPPMIPNPEFIGEWYPRKIPNPDYFDDDHPSHFGPLYGVGFELWTMQ 396

  Fly   416 SDILFDNLIITDDVEVARDFAANSF-----------------DIKRRYIDRERDSIVNK---VVE 460
            .:|.|.|:.:...:|.|......:|                 :.:..::|.|.:.|:.|   |.:
pombe   397 PNIRFSNIYVGHSIEDAERLGNETFLPKLKAERELLSKQESMEKQSMHVDEESNQILEKFLDVYD 461

  Fly   461 LVK-----------DY--------PSIWAIGLVAIV-ALVALTKCCRF-------------GTTK 492
            ::|           ||        |.| .|.:||:: :|.|:...|.|             |||:
pombe   462 IIKAKLPPNVAEKVDYYVETIIETPEI-GIAIVAVLGSLTAVILTCYFYFFASSSPASLSTGTTE 525

  Fly   493 IQE------SAAAESKKTD---DPQPHEP 512
            .::      ....|::|.|   .|:...|
pombe   526 AEKEQQEKFKQETETEKIDVSYAPETESP 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1924NP_572788.2 Calreticulin 70..425 CDD:278680 159/375 (42%)
cnx1NP_001342872.1 Calreticulin 42..406 CDD:306718 160/383 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 352 1.000 Domainoid score I171
eggNOG 1 0.900 - - E1_KOG0675
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 363 1.000 Inparanoid score I453
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001260
OrthoInspector 1 1.000 - - otm47254
orthoMCL 1 0.900 - - OOG6_102144
Panther 1 1.100 - - O PTHR11073
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X875
TreeFam 1 0.960 - -
1110.820

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