DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1924 and cnx-1

DIOPT Version :10

Sequence 1:NP_572788.2 Gene:CG1924 / 32180 FlyBaseID:FBgn0030377 Length:570 Species:Drosophila melanogaster
Sequence 2:NP_499176.1 Gene:cnx-1 / 176390 WormBaseID:WBGene00000567 Length:619 Species:Caenorhabditis elegans


Alignment Length:603 Identity:226/603 - (37%)
Similarity:331/603 - (54%) Gaps:90/603 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LLLSAVKAIDSDLEWDDFEDVDVEDVQQEDVDEKPTYKSPVIDAKKF------HFADHFDDMEAS 80
            ||:|::::.|     |.||| |.|:|.:.. |:|..:...:..|.|.      :|.|:|......
 Worm    14 LLVSSIRSDD-----DVFED-DEEEVTKGS-DDKEEFVPSLFVAPKLSDKSTPNFFDYFPVGSKI 71

  Fly    81 TRRWVLSQAKKDDIADEISKYDGIWNWEPPQRMVWANDLGLVLKSKAKHAAIAAHLHQPFDFKSE 145
            ...|:.|.|||||:..:|:||:|.|:...|.::....||||::|:||:|.||||.|:.||.|.: 
 Worm    72 GLTWIKSLAKKDDVDSDIAKYNGEWSIGAPTKVSIEGDLGLIVKTKARHHAIAAKLNTPFAFDA- 135

  Fly   146 KPLVVQYEITIQKGQECGGSYLKLLSAGKETEQLQTFNDKTPYTIMFGPDKCGKDVTIHFIFKHV 210
            ...||||:|..::||||||.||||||.|.| :.|..|.|||.|||||||||||....:|.||::.
 Worm   136 NTFVVQYDIKFEEGQECGGGYLKLLSEGAE-KDLANFQDKTAYTIMFGPDKCGATGKVHLIFRYK 199

  Fly   211 NPINGTITEKHCNKPNNSFEEPFKDKLPHLYQLVVRPDNSFEIRIDHKIIKEGSLLTDFKPPVNP 275
            |||||||:|.|.|:|.......:.|...||:.|||:|...:.:.:|.|.:..|::::|..|.:.|
 Worm   200 NPINGTISEYHANQPTTIGSTYWDDHNTHLFTLVVKPTGEYSVSVDGKSLYYGNMMSDVTPALTP 264

  Fly   276 PAEIDDPNDHKPDSWDEREKIPDPTVHKPEDWDENETLKLPDA-------------DMIFDPTAT 327
            |.:|.|..|.||..|||||.|.|.:..||:||||||...:.|.             ::|.||.|.
 Worm   265 PKQIFDETDLKPVDWDERENIEDESAVKPDDWDENEPQSVVDEAATKPYDWNEEENELIADPEAK 329

  Fly   328 KPEDWDDEIDGEWQAPMVDNPVCKKDQTCG-----IIRNPNYKGKWIAPMIDNPNYQGKWAPRKI 387
            ||:|||:::||.|:||::|||.||....||     .|:||.||||||.|.|.||.::|||..|.|
 Worm   330 KPQDWDEDMDGSWEAPLIDNPACKGLSGCGTWKAPTIKNPKYKGKWIRPKISNPAFKGKWTARLI 394

  Fly   388 ANPDFFEDLKPFQ-MTPISAVGLELWSMSSDILFDNLIITDDVEVARDFAANSFDIKRRYIDR-- 449
            .||::||. |||. :.||:|||:|:|:||.:|||||::||...|.:.|.|..:|.:|::...|  
 Worm   395 DNPNYFEP-KPFAGLAPITAVGIEMWTMSENILFDNILITSSEEDSSDVAKQTFYVKQKEEYRLA 458

  Fly   450 ----ERDSIVNKVVELVKDYPSIWAIGLVAI-VALVALTKCCRFGT--------TKIQESAAAES 501
                ..:....::::...:.|.:||:.::.: :.|||:...| ||.        .|..::.:|:.
 Worm   459 AATGNGNGFFQQIIDATNEKPWLWAVYILCVLLPLVAIGVFC-FGKQSKPTPNFAKKSDAYSADD 522

  Fly   502 KKT-----DDPQP---------HEPRPWGSRMSRAKKWKLTIPPRRAYSCPLPPKKKLDDNEWKF 552
            .:.     ||.:.         ::|.|.||:                 |.|.|     .|.|   
 Worm   523 DRVPNLVDDDEEEIIGDEEDDVNQPGPSGSQ-----------------SNPEP-----QDEE--- 562

  Fly   553 KAAKKQKHTQTKESNTEE 570
            :.|::|....::.|..||
 Worm   563 ENAEQQSANSSQSSAAEE 580

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1924NP_572788.2 Calreticulin 70..425 CDD:459737 176/373 (47%)
cnx-1NP_499176.1 Calreticulin 62..432 CDD:459737 175/372 (47%)

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