DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11356 and SAR2

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_192117.1 Gene:SAR2 / 827368 AraportID:AT4G02080 Length:193 Species:Arabidopsis thaliana


Alignment Length:142 Identity:39/142 - (27%)
Similarity:65/142 - (45%) Gaps:23/142 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKTELGHRL--SRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLT--EVGGN 89
            :|.::|.||...:|||.|.|.|  .|:.:.:..|..|         |.|..|.:::..  ::||:
plant    19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPT---------SEELSIGKIKFKAFDLGGH 74

  Fly    90 VEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQ-LAGKPVLLVASRHRVGVQL 153
            ...:|:||.|||...|::|..|........:....|  |.|:..: ||..|.|::.::       
plant    75 QIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKEL--DALLSDESLASVPFLILGNK------- 130

  Fly   154 YDVEYAFGLEEL 165
            .|:.||...:||
plant   131 IDIPYAASEDEL 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 38/139 (27%)
SAR2NP_192117.1 Sar1 2..192 CDD:206645 39/142 (27%)

Return to query results.
Submit another query.