DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and arl3b

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001038373.1 Gene:arl3b / 797451 ZFINID:ZDB-GENE-030131-7518 Length:182 Species:Danio rerio


Alignment Length:179 Identity:45/179 - (25%)
Similarity:84/179 - (46%) Gaps:21/179 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKTELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLTEVGGNVEMQ 93
            :|.::|:||....|||.|..:|:  |.|......|.|   :.:||.:....:|.:.::||..:::
Zfish    16 QEVRILLLGLDNGGKTTLLKQLA--SEDITHITPTQG---FNIKSVQSQGFKLNVWDIGGQRKIR 75

  Fly    94 RLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASRHRVGVQLYDVEY 158
            ..|::|:.::..|||..| .||....:.|...|.:.|...:|:|.|||:.|::.       |:..
Zfish    76 PYWRNYFENTDVLIYVID-SADRKRFEETGQELAELLDEEKLSGVPVLVFANKQ-------DLLT 132

  Fly   159 AFGLEELAKSCDC--------PLLICHMDETEDLHRGIRWLCHQLMARK 199
            |....|:|:..:.        .:..|.....|.:..|:.|:|..:.|::
Zfish   133 AAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKSVNAKR 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 43/169 (25%)
arl3bNP_001038373.1 Arl3 3..175 CDD:206721 43/171 (25%)

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