DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and Arl13a

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_083223.1 Gene:Arl13a / 74448 MGIID:1921698 Length:372 Species:Mus musculus


Alignment Length:210 Identity:47/210 - (22%)
Similarity:91/210 - (43%) Gaps:36/210 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 ISCCRTSSPAMEEFQ----VLILGPSGSGKTELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPI 78
            ::.|.:.....||.|    ::::|...|||:.|.....|:...:..:|         |:..:..:
Mouse     5 LTACWSRQKTTEEKQRNVTIIVIGLDNSGKSRLIEAFQRLIPSKMHKE---------MRPTQTTL 60

  Fly    79 A----QLQLTEVGGNVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKP 139
            .    |:.:.::.|:|:.:..|..|||.:|.||:..| .:|...:|....:||..:...:::|||
Mouse    61 LLDDYQVSIYDLTGDVKGREKWSSYYAQAHGLIFVVD-SSDIARIQEVKIILTRIMFDKRVSGKP 124

  Fly   140 VLLVASRHRVGVQLYD---VEYAFGLEELAKSCDCPLLICHMDETEDLHR-----------GIRW 190
            :|::|::......|..   :||.. ||.|......   :|.::....:.|           |:||
Mouse   125 ILILANKQDKKNALLPCDIIEYLL-LERLVNETRS---MCRVEPCSTIKRIPKRQQKPIVVGLRW 185

  Fly   191 LCHQLMARKSQLDQR 205
            |...:..:.|:|..|
Mouse   186 LLAAIGDQYSELYTR 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 41/183 (22%)
Arl13aNP_083223.1 Arl2l1_Arl13_like 23..189 CDD:133361 40/179 (22%)

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