DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11356 and arl5c

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001037909.1 Gene:arl5c / 733518 XenbaseID:XB-GENE-5898153 Length:179 Species:Xenopus tropicalis


Alignment Length:196 Identity:39/196 - (19%)
Similarity:71/196 - (36%) Gaps:59/196 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKT---------ELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQ---L 81
            :|.:|:|:|...:|||         |:.|....:.                 .:.||.|::   .
 Frog    15 QEHKVIIVGLDNAGKTTILYQFLMNEVVHTAPTIG-----------------SNVEEIISRNTHF 62

  Fly    82 QLTEVGGNVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASR 146
            .:.::||...::..|..||:::..:|...| ..|...:..|...|...|...:|....:|:.|::
 Frog    63 LMWDIGGQETLRATWNSYYSNTEFVILVID-STDRERLPETREELYKMLAHEELKDAAILIFANK 126

  Fly   147 HRVGVQLYDVEYAFGLEELAKS---------------CDCPLLICHMDETEDLHRGIRWLCHQLM 196
            .       ||:.:....|::.|               | |.|      ..|.|..|:.||..::.
 Frog   127 Q-------DVKDSMTASEISSSLALGAIRDRAWHIQGC-CAL------TGEGLPAGLDWLKSRVT 177

  Fly   197 A 197
            |
 Frog   178 A 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 37/188 (20%)
arl5cNP_001037909.1 Arl5_Arl8 3..175 CDD:133353 38/191 (20%)

Return to query results.
Submit another query.