DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and Arl3

DIOPT Version :9

Sequence 1:NP_572786.2 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:248 Species:Drosophila melanogaster
Sequence 2:XP_006231621.1 Gene:Arl3 / 64664 RGDID:69327 Length:186 Species:Rattus norvegicus


Alignment Length:177 Identity:47/177 - (26%)
Similarity:84/177 - (47%) Gaps:17/177 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKTELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLTEVGGNVEMQ 93
            :|.::|:||...:|||.|..:|:  |.|......|.|   :.:||.:....:|.:.::||..:::
  Rat    20 QEVRILLLGLDNAGKTTLLKQLA--SEDISHITPTQG---FNIKSVQSQGFKLNVWDIGGQRKIR 79

  Fly    94 RLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASRHRVGVQLYDVEY 158
            ..|:.|:.::..|||..| .||....:.|...||:.|...:|:..|||:.|::..:.......|.
  Rat    80 PYWRSYFENTDILIYVID-SADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEI 143

  Fly   159 AFGL------EELAKSCDCPLLICHMDETEDLHRGIRWLCHQLMARK 199
            |.||      :.:.:...|..|     ..|.:..|:.|:|..:.|:|
  Rat   144 AEGLNLHTIRDRVWQIQSCSAL-----TGEGVQDGMNWVCKNVNAKK 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.2 Gem1 27..>111 CDD:224025 23/81 (28%)
P-loop_NTPase 32..194 CDD:304359 44/167 (26%)
Arl3XP_006231621.1 Arl3 7..180 CDD:206721 45/170 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
32.870

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