DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and sar1b

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001015871.1 Gene:sar1b / 548588 XenbaseID:XB-GENE-944209 Length:198 Species:Xenopus tropicalis


Alignment Length:178 Identity:39/178 - (21%)
Similarity:72/178 - (40%) Gaps:29/178 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QVLILGPSGSGKTELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLT--EVGGNVEMQR 94
            :::.||...:|||.|...|.       |......|......|.|..||.:..|  ::||:.:.:|
 Frog    27 KLVFLGLDNAGKTTLLQMLK-------DGRMGQYVPTLHPTSEELTIAGMTFTTFDLGGHTQARR 84

  Fly    95 LWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQ-LAGKPVLLVASR------------ 146
            :||:|..:.:.:::..|......:.:....|  |.|:..: :|..|:||:.::            
 Frog    85 VWKNYLPAINGIVFLIDCADHDRLSESKREL--DALMADETIANVPILLLGNKIDRPEAISEERL 147

  Fly   147 -HRVGVQLYDVEYAFGLEELAKSCDCPL--LICHMDETEDLHRGIRWL 191
             |..|:  |......|.....:..:.||  .:|.:.:.:....|.|||
 Frog   148 LHLFGI--YGQTTGKGKVPQKQLANRPLEVFMCSILKRQGYGEGFRWL 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 39/178 (22%)
sar1bNP_001015871.1 Sar1 3..197 CDD:206645 39/178 (22%)

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