DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11356 and dnd

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_650995.1 Gene:dnd / 42580 FlyBaseID:FBgn0038916 Length:179 Species:Drosophila melanogaster


Alignment Length:204 Identity:52/204 - (25%)
Similarity:86/204 - (42%) Gaps:36/204 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGLLCAKLCDCCCYHQTISCCRTSSPAME-EFQVLILGPSGSGKTELGHRLSRVSRDRDDQEATN 64
            ||||              |..|...|..| |.::|:||...:|||.:..:|:  |.|......|.
  Fly     1 MGLL--------------SLLRKLRPNPEKEARILLLGLDNAGKTTILKQLA--SEDITTVTPTA 49

  Fly    65 GVRCYRMKSAEEPIAQLQLTEVGGNVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDC 129
            |   :.:||......:|.:.::||..:::..||:|:|::..|||..|. .|...:....|.|.:.
  Fly    50 G---FNIKSVAADGFKLNVWDIGGQWKIRPYWKNYFANTDVLIYVIDC-TDRTRLPEAGSELFEM 110

  Fly   130 LVGTQLAGKPVLLVASRHRVGVQLYDVEYAFGLEELAKSCDCPLL--------ICHMDETEDLHR 186
            |:..:|...|||:.|::.       |:..|....|:|:......|        .|...:...|..
  Fly   111 LMDNRLKQVPVLIFANKQ-------DMPDAMSAAEVAEKMSLVQLQGRTWEIKACTAVDGTGLKE 168

  Fly   187 GIRWLCHQL 195
            |:.|:|..:
  Fly   169 GMDWVCKNM 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 43/169 (25%)
dndNP_650995.1 Arl3 3..176 CDD:206721 50/199 (25%)

Return to query results.
Submit another query.