DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and Arf1

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_476955.1 Gene:Arf1 / 40506 FlyBaseID:FBgn0010348 Length:182 Species:Drosophila melanogaster


Alignment Length:180 Identity:36/180 - (20%)
Similarity:76/180 - (42%) Gaps:31/180 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKT------ELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLTEVG 87
            :|.::|::|...:|||      :||..::.:        .|.|   :.:::.|.......:.:||
  Fly    16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTI--------PTIG---FNVETVEYKNISFTVWDVG 69

  Fly    88 GNVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASRHRV--G 150
            |..:::.||:||:.::..||:..|......:.:....|:. .|...:|....:|:.|::..:  .
  Fly    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMR-MLAEDELRDAVLLIFANKQDLPNA 133

  Fly   151 VQLYDVEYAFGLEELAK-----SCDCPLLICHMDETEDLHRGIRWLCHQL 195
            :...::....||..|..     ...|      ....:.|:.|:.||.:||
  Fly   134 MNAAEITDKLGLHSLRNRNWYIQATC------ATSGDGLYEGLDWLSNQL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 33/174 (19%)
Arf1NP_476955.1 ARF 5..179 CDD:128474 36/180 (20%)

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