DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and arf1

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_989018.1 Gene:arf1 / 394614 XenbaseID:XB-GENE-950251 Length:181 Species:Xenopus tropicalis


Alignment Length:184 Identity:38/184 - (20%)
Similarity:77/184 - (41%) Gaps:31/184 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKT------ELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLTEVG 87
            :|.::|::|...:|||      :||..::.:        .|.|   :.:::.|.......:.:||
 Frog    16 KEMRILMVGLDAAGKTTILYKLKLGEIVTTI--------PTIG---FNVETVEYKNISFTVWDVG 69

  Fly    88 GNVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASRHRV--G 150
            |..:::.||:||:.::..||:..|......|.:....|:. .|...:|....:|:.|::..:  .
 Frog    70 GQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMR-MLAEDELRDAVLLVFANKQDLPNA 133

  Fly   151 VQLYDVEYAFGLEELAK-----SCDCPLLICHMDETEDLHRGIRWLCHQLMARK 199
            :...::....||..|..     ...|      ....:.|:.|:.||.:||...|
 Frog   134 MNAAEITDKLGLHSLRHRNWYIQATC------ATSGDGLYEGLDWLSNQLRNHK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 34/174 (20%)
arf1NP_989018.1 ARF 5..179 CDD:128474 37/180 (21%)

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