DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11356 and arl8a

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_988990.1 Gene:arl8a / 394587 XenbaseID:XB-GENE-866659 Length:186 Species:Xenopus tropicalis


Alignment Length:182 Identity:40/182 - (21%)
Similarity:82/182 - (45%) Gaps:24/182 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKTELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLTEVGGNVEMQ 93
            ||.::.::|...||||...:.::. .:..:|...|.|   :.|:...:....::|.::||....:
 Frog    19 EEMELTLVGLQYSGKTTFVNVIAS-GQFNEDMIPTVG---FNMRKITKGNVTIKLWDIGGQPRFR 79

  Fly    94 RLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASRHRVGVQLYDVEY 158
            .:|:.|.....|::|..| .||...::.:.:.|.:.|...||.|.|||::.::.       |:..
 Frog    80 SMWERYCRGVSAIVYMVD-AADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKR-------DIPG 136

  Fly   159 AFGLEELAKSCD----------CPLLICHMDETEDLHRGIRWLCHQLMARKS 200
            |...:||.:..:          |..:.|  .|.:::...::||.....:|:|
 Frog   137 ALDEKELIERMNLSAIQDREICCYSISC--KEKDNIDITLQWLIQHSKSRRS 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 36/171 (21%)
arl8aNP_988990.1 Arl10_like 22..180 CDD:206724 36/171 (21%)

Return to query results.
Submit another query.