DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and Arl6

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_001102312.1 Gene:Arl6 / 363760 RGDID:1305535 Length:187 Species:Rattus norvegicus


Alignment Length:171 Identity:48/171 - (28%)
Similarity:71/171 - (41%) Gaps:17/171 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKTELGHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQLQLT--EVGGNVE 91
            :|..||.||...||||.:.::|...:....|...|.|....:.||     :.|..|  ::.|...
  Rat    16 KEVHVLCLGLDNSGKTTIINKLKPSNAQVQDIVPTIGFSIEKFKS-----SSLSFTVFDMSGQGR 75

  Fly    92 MQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGK--PVLLVASRH--RVGVQ 152
            .:.||:|||....|:|:..| .:|.:.|......|...|....:..:  |:|..|::.  |..|.
  Rat    76 YRNLWEHYYKDGQAIIFVVD-SSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVT 139

  Fly   153 LYDVEYAFGLEELAKSCDCPLLICHMD--ETEDLHRGIRWL 191
            ...|.....||.:.   |.|..||..|  :.|.|..|:.||
  Rat   140 SVKVSQLLCLENIK---DKPWHICASDALKGEGLQEGVDWL 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 47/168 (28%)
Arl6NP_001102312.1 Arl6 19..178 CDD:206722 47/168 (28%)

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