DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11356 and Arfrp1

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_572526.1 Gene:Arfrp1 / 31841 FlyBaseID:FBgn0030088 Length:200 Species:Drosophila melanogaster


Alignment Length:189 Identity:45/189 - (23%)
Similarity:78/189 - (41%) Gaps:47/189 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 EEFQVLILGPSGSGKTEL-------------GHRLSRVSRDRDDQEATNGVRCYRMKSAEEPIAQ 80
            :::.|:|||...:|||..             |...|:::       .|.|:   .:.:.:....:
  Fly    16 DDYCVVILGLDNAGKTTYLEAAKTTFTRNYKGLNPSKIT-------TTVGL---NIGTIDVQGVR 70

  Fly    81 LQLTEVGGNVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVAS 145
            |...::||..|:|.||..||..||.:||..| ..|...|:.:.::....:....|:|.|:|::|:
  Fly    71 LNFWDLGGQQELQSLWDKYYQESHGVIYVID-SNDRERMEESKAIFDKMIKNELLSGVPLLILAN 134

  Fly   146 RHRVGVQLYDVEYAFGLEE----------LAKSCDC---PLLICHMDETEDLHRGIRWL 191
            :.       |:....|:.|          |....||   |:...|   .|.:..||:||
  Fly   135 KQ-------DLPDVMGVREIKPVFQQAGALIGRRDCLTIPVSALH---GEGVDEGIKWL 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 45/186 (24%)
Arfrp1NP_572526.1 Arfrp1 19..186 CDD:206725 45/186 (24%)

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