DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11356 and Arl4a

DIOPT Version :10

Sequence 1:NP_572786.3 Gene:CG11356 / 32178 FlyBaseID:FBgn0030375 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_062059.1 Gene:Arl4a / 29308 RGDID:2152 Length:200 Species:Rattus norvegicus


Alignment Length:207 Identity:48/207 - (23%)
Similarity:88/207 - (42%) Gaps:28/207 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TSSPAMEEFQVLILGPSGSGKTELGHRLSRVSRDRDDQEATNGVRCYRMK--SAEEPIAQLQLTE 85
            :|.|:.:.|.::|||...:|||.:.:||.  ..:..:...|.|....::|  ............:
  Rat    13 SSLPSFQSFHIVILGLDCAGKTTVLYRLQ--FNEFVNTVPTKGFNTEKIKVTLGNSKTVTFHFWD 75

  Fly    86 VGGNVEMQRLWKHYYASSHALIYCFDLGADPMVMQGTFSLLTDCLVGTQLAGKPVLLVASRH--R 148
            |||..:::.|||.|...:..:::..| ..|...|:...:.|......::..|.|||:||::.  |
  Rat    76 VGGQEKLRPLWKSYTRCTDGIVFVVD-SVDVERMEEAKTELHKITRISENQGVPVLIVANKQDLR 139

  Fly   149 VGVQLYDVEYAFGLEELAKSCDCPLLICHMDET-----EDLHRGIRWLCHQLMARKSQLDQRIRY 208
            ..:.|.::|....:.||:.|..     .|:..|     :.|..|:..|...::.|:..|.|    
  Rat   140 NSLSLSEIEKLLAMGELSSSTP-----WHLQPTCAIIGDGLKEGLEKLHDMIIKRRKMLRQ---- 195

  Fly   209 DVNMQVWQRRKR 220
                   |::||
  Rat   196 -------QKKKR 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11356NP_572786.3 P-loop containing Nucleoside Triphosphate Hydrolases 32..194 CDD:476819 39/170 (23%)
Arl4aNP_062059.1 Arl4_Arl7 18..200 CDD:206719 44/200 (22%)

Return to query results.
Submit another query.